[PDF][PDF] Do deep neural networks outperform kernel regression for functional connectivity prediction of behavior

T He, R Kong, A Holmes, M Nguyen, M Sabuncu… - BioRxiv, 2018 - scholar.archive.org
There is significant interest in the development and application of deep neural networks
(DNNs) to neuroimaging data. A growing literature suggests that DNNs outperform their …

Refined measure of functional connectomes for improved identifiability and prediction

B Cai, G Zhang, W Hu, A Zhang, P Zille… - Human brain …, 2019 - Wiley Online Library
Brain functional connectome analysis is commonly based on population‐wise inference.
However, in this way precious information provided at the individual subject level may be …

[HTML][HTML] Polyneuro risk scores capture widely distributed connectivity patterns of cognition

N Byington, G Grimsrud, MA Mooney… - Developmental …, 2023 - Elsevier
Resting-state functional connectivity (RSFC) is a powerful tool for characterizing brain
changes, but it has yet to reliably predict higher-order cognition. This may be attributed to …

[PDF][PDF] Understanding global feature contributions with additive importance measures

I Covert, SM Lundberg, SI Lee - Advances in Neural …, 2020 - proceedings.neurips.cc
Understanding the inner workings of complex machine learning models is a long-standing
problem and most recent research has focused on local interpretability. To assess the role of …

[HTML][HTML] Brain mapping of behavioral domains using multi-scale networks and canonical correlation analysis

I Fernandez-Iriondo, A Jimenez-Marin… - Frontiers in …, 2022 - frontiersin.org
Simultaneous mapping of multiple behavioral domains into brain networks remains a major
challenge. Here, we shed some light on this problem by employing a combination of …

Global signal regression strengthens association between resting-state functional connectivity and behavior

J Li, R Kong, R Liégeois, C Orban, Y Tan, N Sun… - NeuroImage, 2019 - Elsevier
Global signal regression (GSR) is one of the most debated preprocessing strategies for
resting-state functional MRI. GSR effectively removes global artifacts driven by motion and …

A Bayesian method for reducing bias in neural representational similarity analysis

M Cai, NW Schuck, JW Pillow… - Advances in Neural …, 2016 - proceedings.neurips.cc
In neuroscience, the similarity matrix of neural activity patterns in response to different
sensory stimuli or under different cognitive states reflects the structure of neural …

[HTML][HTML] Fighting or embracing multiplicity in neuroimaging? neighborhood leverage versus global calibration

G Chen, PA Taylor, RW Cox, L Pessoa - NeuroImage, 2020 - Elsevier
Neuroimaging faces the daunting challenge of multiple testing–an instance of multiplicity–
that is associated with two other issues to some extent: low inference efficiency and poor …

[HTML][HTML] ConnSearch: A framework for functional connectivity analysis designed for interpretability and effectiveness at limited sample sizes

PC Bogdan, AD Iordan, J Shobrook, F Dolcos - Neuroimage, 2023 - Elsevier
Functional connectivity studies increasingly turn to machine learning methods, which
typically involve fitting a connectome-wide classifier, then conducting post hoc interpretation …

[HTML][HTML] Highly adaptive tests for group differences in brain functional connectivity

J Kim, W Pan… - NeuroImage: Clinical, 2015 - Elsevier
Resting-state functional magnetic resonance imaging (rs-fMRI) and other technologies have
been offering evidence and insights showing that altered brain functional networks are …