Promoter architectures and developmental gene regulation

V Haberle, B Lenhard - Seminars in cell & developmental biology, 2016 - Elsevier
Core promoters are minimal regions sufficient to direct accurate initiation of transcription and
are crucial for regulation of gene expression. They are highly diverse in terms of associated …

Mammalian RNA polymerase II core promoters: insights from genome-wide studies

A Sandelin, P Carninci, B Lenhard, J Ponjavic… - Nature Reviews …, 2007 - nature.com
The identification and characterization of mammalian core promoters and transcription start
sites is a prerequisite to understanding how RNA polymerase II transcription is controlled …

Chromatin and DNA sequences in defining promoters for transcription initiation

F Müller, L Tora - Biochimica et Biophysica Acta (BBA)-Gene Regulatory …, 2014 - Elsevier
One of the key events in eukaryotic gene regulation and consequent transcription is the
assembly of general transcription factors and RNA polymerase II into a functional pre …

Diversified transcription initiation complexes expand promoter selectivity and tissue-specific gene expression

A Hochheimer, R Tjian - Genes & development, 2003 - genesdev.cshlp.org
Transcription initiation is a key regulatory step in the control of gene expression. Formation
of a preinitiation complex at the right time and at the right promoter is a prerequisite to …

Metazoan promoters: emerging characteristics and insights into transcriptional regulation

B Lenhard, A Sandelin, P Carninci - Nature Reviews Genetics, 2012 - nature.com
Promoters are crucial for gene regulation. They vary greatly in terms of associated regulatory
elements, sequence motifs, the choice of transcription start sites and other features. Several …

The core promoter is a regulatory hub for developmental gene expression

A Sloutskin, H Shir-Shapira, RN Freiman… - Frontiers in Cell and …, 2021 - frontiersin.org
The development of multicellular organisms and the uniqueness of each cell are achieved
by distinct transcriptional programs. Multiple processes that regulate gene expression …

The gateway to transcription: identifying, characterizing and understanding promoters in the eukaryotic genome

ND Heintzman, B Ren - Cellular and Molecular Life Sciences, 2007 - Springer
Eukaryotic transcriptional regulation requires the integration of complex signals by the
transcriptional promoter. Distinct sequence elements, characteristic chromatin modifications …

Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis

C Nepal, Y Hadzhiev, C Previti, V Haberle, N Li… - Genome …, 2013 - genome.cshlp.org
Spatiotemporal control of gene expression is central to animal development. Core promoters
represent a previously unanticipated regulatory level by interacting with cis-regulatory …

The core promoter: At the heart of gene expression

YM Danino, D Even, D Ideses… - Biochimica et Biophysica …, 2015 - Elsevier
The identities of different cells and tissues in multicellular organisms are determined by
tightly controlled transcriptional programs that enable accurate gene expression. The …

A paired-end sequencing strategy to map the complex landscape of transcription initiation

T Ni, DL Corcoran, EA Rach, S Song, EP Spana… - Nature …, 2010 - nature.com
Recent studies using high-throughput sequencing protocols have uncovered the complexity
of mammalian transcription by RNA polymerase II, helping to define several initiation …