Current methodological challenges of single-cell and single-nucleus RNA-sequencing in glomerular diseases

D Deleersnijder, J Callemeyn, I Arijs… - Journal of the …, 2021 - journals.lww.com
… insights in the complex pathophysiology of glomerular diseases. Single-cell RNA sequencing
(scRNA-seq) and single-nucleus RNA-seq (snRNA-seq) are powerful new methods that …

Single-cell RNA profiling of glomerular cells shows dynamic changes in experimental diabetic kidney disease

J Fu, KM Akat, Z Sun, W Zhang… - Journal of the …, 2019 - journals.lww.com
… This was consistent with the findings of our previous bulk RNA sequencing data of sorted
GECs from the same animal model, 4 although there was only approximately 10% overlap in …

RNA sequencing identifies novel translational biomarkers of kidney fibrosis

FL Craciun, V Bijol, AK Ajay, P Rao… - Journal of the …, 2016 - journals.lww.com
… those with autoimmune diseases, idiopathic glomerular diseases, and AKI. Clinicopathologic
diagnoses were diabetic kidney disease (n=6), hypertensive or vascular disease (n=13), or …

[HTML][HTML] Urine single-cell RNA sequencing in focal segmental glomerulosclerosis reveals inflammatory signatures

KZ Latt, J Heymann, JH Jessee, AZ Rosenberg… - Kidney international …, 2022 - Elsevier
… utility in other glomerular diseases, we … bulk RNA-seq data of urine samples from another
multiethnic cohort of subjects with lupus nephritis and found that subjects with active disease (…

[HTML][HTML] Single-cell RNA and transcriptome sequencing profiles identify immune-associated key genes in the development of diabetic kidney disease

X Zhang, P Chao, L Zhang, L Xu, X Cui… - Frontiers in …, 2023 - frontiersin.org
… We performed single-cell RNA sequencing analysis (… identifying rare cells related to the
disease by using the single-… diabetic kidney diseases by scRNA-seq of glomerular cells (19). Xi …

[HTML][HTML] Identification of galectin-3 as potential biomarkers for renal fibrosis by RNA-sequencing and clinicopathologic findings of kidney biopsy

SM Ou, MT Tsai, HY Chen, FA Li, WC Tseng… - Frontiers in …, 2021 - frontiersin.org
disease (CKD) leads to upregulation of plasma Gal-3 expression in corresponding biopsy
findings and RNA sequencing … Gal-3 levels, estimated glomerular filtration rate (eGFR) and …

[HTML][HTML] Identification of novel long noncoding RNAs associated with TGF-β/Smad3-mediated renal inflammation and fibrosis by RNA sequencing

Q Zhou, ACK Chung, XR Huang, Y Dong, X Yu… - The American journal of …, 2014 - Elsevier
RNA sequencing (RNA-Seq) accelerates the discovery of novel ncRNAs because RNA-Seq
anti-glomerular basement membranous glomerulonephritis (anti-GBM GN) and nonimmune …

[HTML][HTML] Glomerular kidney diseases in the single-cell era

KZ Latt, J Heymann, T Yoshida, JB Kopp - Frontiers in Medicine, 2021 - frontiersin.org
RNA sequencing (RNA-seq). Application of these single-cell methods to glomerular diseases
… will also discuss how this approach could be applied to other primary glomerular diseases. …

Mesangial cell-derived CircRNAs in chronic glomerulonephritis: RNA sequencing and bioinformatics analysis

JH Fan, XM Li - Renal Failure, 2024 - Taylor & Francis
… Third, the GEO dataset used in this study is derived from glomerular tissue, which may
mask cell-type-specific expression changes. Further studies are warranted to overcome the …

Molecular insights into the early stage of glomerular injury in IgA nephropathy using single-cell RNA sequencing

S Zambrano, L He, T Kano, Y Sun, E Charrin, M Lal… - Kidney International, 2022 - Elsevier
… Steffen Durinck for kindly providing the published glomerular disease data. This study was
supported by grants from KI/AZ Integrated Cardio Metabolic Center (JP and CB), Swedish …