Conformational flexibility and structural variability of SARS-CoV2 S protein

I Pramanick, N Sengupta, S Mishra, S Pandey, N Girish… - Structure, 2021 - cell.com
… ), S2 domain, and stalk domain of S protein conformations at various pH values. Several key
conformation. This study will assist in developing novel therapeutic measures against SARS

Flexibility and mobility of SARS-CoV-2-related protein structures

RA Römer, NS Römer, AK Wallis - Scientific Reports, 2021 - nature.com
… through multiple conformational steps starting from the crystal structures of SARS-CoV-2-…
This results in a comprehensive overview of rigidity and the possible flexible motion trajectories …

pH-dependent conformational flexibility of the SARS-CoV main proteinase (Mpro) dimer: molecular dynamics simulations and multiple X-ray structure analyses

J Tan, KHG Verschueren, K Anand, J Shen… - Journal of molecular …, 2005 - Elsevier
SARS. The enzyme has been shown by X-ray crystallography to undergo significant pH-dependent
conformational changes. Here, we assess the conformational flexibility of the M pro …

Conformational flexibility in neutralization of SARS-CoV-2 by naturally elicited anti-SARS-CoV-2 antibodies

R Li, M Mor, B Ma, AE Clark, J Alter, M Werbner… - Communications …, 2022 - nature.com
… an unusual recognition flexibility type of binding involving five different conformations. TAU-…
exceptional conformational flexibility. According to the fitted structure of each conformation, …

SARS-CoV-2 spike protein: flexibility as a new target for fighting infection

CL Pierri - Signal Transduction and Targeted Therapy, 2020 - nature.com
… Cryo-electron microscopy (cryo-EM) allowed to solve the structure of the spike protein of
SARS-CoV-2 confirming that its prefusion conformation has the same overall trimeric structure …

Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures

R Melero, COS Sorzano, B Foster, JL Vilas, M Martínez… - IUCrJ, 2020 - journals.iucr.org
… , the flexibility and conformational dynamics of the SARS-CoV-… not well defined, stable spike
conformations, but virtually a … maximal variance were modeled by flexible fitting. The results …

The flexibility of ACE2 in the context of SARS-CoV-2 infection

EP Barros, L Casalino, Z Gaieb, AC Dommer, Y Wang… - Biophysical journal, 2021 - cell.com
… This flexibility translates into an ensemble of ACE2 homodimer conformations that could …
of the host receptor toward the large spike conformational changes required for cell fusion. This …

A higher flexibility at the SARS-CoV-2 main protease active site compared to SARS-CoV and its potentialities for new inhibitor virtual screening targeting multi …

REO Rocha, EJF Chaves, PHC Fischer… - Journal of …, 2022 - Taylor & Francis
Full article: A higher flexibility at the SARS-CoV-2 main protease active site compared to
SARS-CoV and its potentialities for new inhibitor virtual screening targeting multi-conformers …

Viewing SARS-CoV-2 nucleocapsid protein in terms of molecular flexibility

T Matsuo - Biology, 2021 - mdpi.com
… In conclusion, the molecular flexibility as well as conformations of N CoV2 plays a critical
role in drug-binding, RNA-binding and formation of the droplets. Knowledge of the structure …

Modelling conformational state dynamics and its role on infection for SARS-CoV-2 Spike protein variants

N Teruel, O Mailhot… - PLoS computational …, 2021 - journals.plos.org
… severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) … In 2003 the SARS coronavirus
(SARS-CoV) pandemic caused … In our analyses, flexibility properties and conformational