Bioinformatic prediction of potential T cell epitopes for SARS-Cov-2

K Kiyotani, Y Toyoshima, K Nemoto… - Journal of human …, 2020 - nature.com
… By comparing the sequences of these predicted T cell epitopes to the other … class II epitopes
that have high homologies to SARS-CoV. To further select commonly-available epitopes that …

Machine learning techniques for the prediction of B-cell and T-cell epitopes as potential vaccine targets with a specific focus on SARS-CoV-2 pathogen: A review

SNH Bukhari, A Jain, E Haq, A Mehbodniya, J Webber - Pathogens, 2022 - mdpi.com
… here that the application of epitope prediction tools/methods to SARS-CoV-2 presented in …
for SARS-CoV-2 epitope prediction. Another reason to place special emphasis on SARS-CoV-…

Prediction and evolution of B cell epitopes of surface protein in SARS-CoV-2

JR Lon, Y Bai, B Zhong, F Cai, H Du - Virology journal, 2020 - Springer
epitopes prediction of SARS-CoV-2 [34] and due to the fact that S protein has been reported
to be the directly binding molecule of SARS-CoV-2 to ACE2 [35], the prediction of epitopes

[HTML][HTML] Epitope based vaccine prediction for SARS-COV-2 by deploying immuno-informatics approach

A Joshi, BC Joshi, MA Mannan, V Kaushik - Informatics in medicine …, 2020 - Elsevier
… as a potential vaccine candidate against SARS-COV-2. A selected putative epitope and
HLA-allelic … B-cell epitopes prediction is still considered to be untrustworthy for both linear and …

Bioinformatics analysis of epitope-based vaccine design against the novel SARS-CoV-2

HZ Chen, LL Tang, XL Yu, J Zhou, YF Chang… - Infectious diseases of …, 2020 - Springer
… to predict B-cell epitopes on spike protein and T-cell epitopes within nucleocapsid protein of
SARS-CoV-… Site of B cell epitopes predicted in SARS-CoV-2 spike protein trimer. Spike 315–…

In silico T cell epitope identification for SARS-CoV-2: Progress and perspectives

MS Sohail, SF Ahmed, AA Quadeer… - Advanced drug delivery …, 2021 - Elsevier
… of the epitope predictions for SARS-CoV-2. … predictions of 61 SARS-CoV-2 in silico studies,
revealing commonalities and differences among the specific SARS-CoV-2 epitopes predicted

Designing a multi-epitope peptide based vaccine against SARS-CoV-2

A Singh, M Thakur, LK Sharma, K Chandra - Scientific reports, 2020 - nature.com
… The server IFN epitope predicted eight epitopes in E glycoprotein, 39 in M, 66 in N … predicted
epitopes with the experimentally determined SARS-CoV-derived B cell and T cell epitopes

[HTML][HTML] Epitope-based peptide vaccines predicted against novel coronavirus disease caused by SARS-CoV-2

L Lin, S Ting, H Yufei, L Wendong, F Yubo, Z Jing - Virus research, 2020 - Elsevier
coronavirus (SARS-CoV-2) has infected millions of people with a large number of deaths
across the globe. The existing therapies are limited in dealing with SARS-CoV… -cell epitopes for …

In silico and in vivo evaluation of SARS-CoV-2 predicted epitopes-based candidate vaccine

MM Shehata, SH Mahmoud, M Tarek… - Molecules, 2021 - mdpi.com
… of different SARS-CoV-2 variants on epitope prediction. (A) … the prediction score for RBDg
epitopes A and D. However, mutation K417T of variant P.1 causes mild decrease in prediction

[HTML][HTML] Development of multi-epitope peptide-based vaccines against SARS-CoV-2

HX Lim, J Lim, SD Jazayeri, S Poppema, CL Poh - Biomedical Journal, 2021 - Elsevier
… Recent advancements in B- and T-cell epitope predictions by bioinformatic … prediction of
linear B-cell epitopes in the SARS-CoV-2 genome [34]. The prediction of class I MHC epitopes