Proteomic snapshot of saliva samples predicts new pathways implicated in SARS-CoV-2 pathogenesis

E Moreno, S Ciordia, SM Fátima, D Jiménez… - Clinical Proteomics, 2024 - Springer
… by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and a … proteomic
analysis in saliva to understand SARS-CoV-2 pathogenesis. As a respiratory virus, SARS-CoV-2 …

Metabolic snapshot of plasma samples reveals new pathways implicated in SARS-CoV-2 pathogenesis

OE Albóniga, D Jiménez… - Journal of Proteome …, 2022 - ACS Publications
SARS-CoV-2 infection. (4) Most studies that have investigated the biochemical pathways
affected by SARS-CoV-2 … the global snapshot of biochemical processes behind SARS-CoV-2 …

Proteomic snapshot of saliva samples predicts new pathways implicated in SARS-CoV-2 pathogenesis

EM del Olmo, S Ciordia, FM Santos, D Jiménez… - Authorea …, 2023 - techrxiv.org
… have focused on the human and bacterial proteomic analysis in saliva to understand
SARS-CoV-2 pathogenesis. As a respiratory virus, SARS-CoV-2 primary target cells reside in the …

[HTML][HTML] Spatial and temporal roles of SARSCoV PLpro—A snapshot

S Yan, G Wu - The FASEB Journal, 2021 - ncbi.nlm.nih.gov
… proteins are bad for SARSCoV because these ubiquitination … the dilemma and provides a
snapshot on how the viral PL pro … on possible strategies to deal with SARSCoV‐2 infections. …

SARS-CoV-2 simulations go exascale to capture spike opening and reveal cryptic pockets across the proteome

MI Zimmerman, G Bowman - Biophysical Journal, 2021 - cell.com
SARS-CoV-2/COVID-19 pandemic continues to threaten global health and socioeconomic
stability. Experiments have revealed snapshots of … seconds of the viral proteome. Our dataset …

Characterization and functional interrogation of the SARS-CoV-2 RNA interactome

A Labeau, L Fery-Simonian, A Lefevre-Utile… - Cell reports, 2022 - cell.com
… with a SARS-CoV-2 interactome in which we have used SARS-CoV-2-infected … SARS-CoV-2
over Mock-infected cells). To rule out biases resulting from infection-induced host proteome

[HTML][HTML] Role of the early secretory pathway in SARS-CoV-2 infection

D Sicari, A Chatziioannou, T Koutsandreas… - Journal of Cell …, 2020 - rupress.org
… Furthermore, because BioInfoMiner enables delineation of the systemic tree snapshot of the
mode of host infection, we exploited this feature to provide a detailed comparison of 12 viral …

SARS-CoV-2 nucleocapsid protein adheres to replication organelles before viral assembly at the Golgi/ERGIC and lysosome-mediated egress

KM Scherer, L Mascheroni, GW Carnell… - Science …, 2022 - science.org
SARS-CoV-2 protein with a series of host cell proteins have been partially studied by combining
light microscopy and proteomics (… well-defined and controlled snapshots in up two four …

SARS-CoV-2-encoded proteome and human genetics: from interaction-based to ribosomal biology impact on disease and risk processes

O Sirpilla, J Bauss, R Gupta, A Underwood… - Journal of Proteome …, 2020 - ACS Publications
… the insights gained for the SARS-CoV-2 proteome, which we … present how the SARS-CoV-2
proteome interacts with human … a current snapshot of SARS-CoV-2 viral proteins (Figure 2). …

Comprehensive proteomics and meta-analysis of COVID-19 host response

H Babačić, W Christ, JE Araújo, G Mermelekas… - Nature …, 2023 - nature.com
… alterations in vitro from an infection experiment at later time points after infection (day 3 and
day 7), we find SARS-CoV-2 induced proteome changes at cellular level that have not been …