[HTML][HTML] Virtual screening approach to identifying influenza virus neuraminidase inhibitors using molecular docking combined with machine-learning-based scoring …

L Zhang, HX Ai, SM Li, MY Qi, J Zhao, Q Zhao, HS Liu - Oncotarget, 2017 - ncbi.nlm.nih.gov
… Despite the advantages of the virtual screening strategy proposed in this study, there are
some noteworthy limitations. First, although we have validated the accuracy of AutoDock, …

[HTML][HTML] Structure-based virtual screening and molecular docking for the identification of potential novel EGFRkinase inhibitors against ovarian cancer

KHW Sait, Q Alam, N Anfinan, O Al-Ghamdi… - …, 2019 - ncbi.nlm.nih.gov
Molecular docking studies using the selected ligand molecules were conducted using Maestro
10.5 molecular … The atomic docking study has done seek to outline the protein - ligands …

Pharmacophore-based virtual screening, molecular docking and molecular dynamics simulations study for the identification of LIM kinase-1 inhibitors

R Singh, AV Pokle, P Ghosh… - Journal of …, 2023 - Taylor & Francis
… ligand molecules were subjected to molecular docking studies. … identified from the virtual
screening that were subsequently … Rigorous docking studies were performed to identify the …

Pharmacophore modeling, virtual screening, and molecular docking studies for discovery of novel Carbonic anhydrase IX inhibitors

CL Lu, L Zhou, ZC Li, X Gao, W Zhang - Medicinal Chemistry Research, 2012 - Springer
… by test set and Fischer’s randomization methods, and it was used for chemical database virtual
screening. … And these compounds were further evaluated using molecular docking study. …

… potential Gly/NMDA receptor antagonists by cheminformatics approach: a combination of pharmacophore modelling, virtual screening and molecular docking studies

VG Ugale, SB Bari - SAR and QSAR in Environmental Research, 2016 - Taylor & Francis
… Pharmacophore model based virtual screening and docking analysis The virtual screening
steps … graphically with the number of hits decreased for every screening step (Figure 4 ). Pre-…

In silico studies on potential TNKS inhibitors: a combination of pharmacophore and 3D-QSAR modelling, virtual screening, molecular docking and molecular dynamics

J Liu, K Feng, Y Ren - Journal of Biomolecular Structure and …, 2018 - Taylor & Francis
… Morphological similarity screening was applied to filter the ZINC database. … study high-scoring
compounds from virtual screening in combination with molecular docking and molecular

Molecular docking, pharmacophore based virtual screening and molecular dynamics studies towards the identification of potential leads for the management of H …

MG Damale, RB Patil, SA Ansari, HM Alkahtani… - RSC …, 2019 - pubs.rsc.org
modeling of the H. pylori specific pantothenate synthetase, the molecular docking studies
with … compounds, pharmacophore based virtual screening, the ADMET studies and the detail …

Promising antivirals for PLpro of SARS-CoV-2 using virtual screening, molecular docking, dynamics, and MMPBSA

R Kumari, V Kumar, P Dhankhar… - Journal of Biomolecular …, 2023 - Taylor & Francis
… The virtual screening and molecular docking analysis of ISG15/Ub-S1 binding allosteric site
(2 nd site… The virtual screening and molecular docking were done using AutoDock Vina and …

Dockey: a modern integrated tool for large-scale molecular docking and virtual screening

L Du, C Geng, Q Zeng, T Huang, J Tang… - Briefings in …, 2023 - academic.oup.com
… In this study, we developed a robust and highly usable GUI tool named Dockey for conducting
molecular docking and virtual screening experiments based on AutoDock and its variants. …

Pharmacophore-enabled virtual screening, molecular docking and molecular dynamics studies for identification of potent and selective histone deacetylase 8 …

K Kashyap, R Kakkar - Computers in Biology and Medicine, 2020 - Elsevier
… In the present work, a detailed virtual screening regimen has been undertaken by using the
two pharmacophore models obtained previously [24] as 3D search queries to identify novel …