Virtual screening of novel noncovalent inhibitors for SARS-CoV 3C-like proteinase

Z Liu, C Huang, K Fan, P Wei, H Chen… - Journal of chemical …, 2005 - ACS Publications
… of SARS 3C-like proteinase based on the structure of transmissible-gastroenteritis-virus
coronavirus … When the coordinates of SARS coronavirus 3C-like proteinase or SARS-CoV Mpro …

Preliminary virtual screening studies to identify GRP78 inhibitors which may interfere with SARS-CoV-2 infection

A Palmeira, E Sousa, A Köseler, R Sabirli, T Gören… - Pharmaceuticals, 2020 - mdpi.com
… of SARS-CoV-2 (+) versus SARS-CoV-2 (−) pneumonia patients. Moreover, to identify drugs
that are potential inhibitors of GRP78, we performed a structure-based virtual screen using …

[HTML][HTML] Identification of natural compounds as SARS-CoV-2 entry inhibitors by molecular docking-based virtual screening with bio-layer interferometry

D Zhang, S Hamdoun, R Chen, L Yang, CK Ip… - Pharmacological …, 2021 - Elsevier
… potential SARS-CoV-2 entry inhibitors using the molecular docking-based virtual screening
coupled … (Isl), were effective in inhibiting SARS-CoV-2-induced cytopathic effect and plaque …

Virtual screening and structure-based 3D pharmacophore approach to identify small-molecule inhibitors of SARS-CoV-2 Mpro

SA Elseginy - Journal of Biomolecular Structure and Dynamics, 2022 - Taylor & Francis
SARS-CoV-2 inhibitors. In this study, 3D pharmacophore structure-based virtual screening
and … and T190 of the binding pocket of M pro SARS-CoV-2. The 6 hits subjected to molecular …

High-throughput virtual screening of small molecule inhibitors for SARS-CoV-2 protein targets with deep fusion models

GA Stevenson, D Jones, H Kim, WFD Bennett… - Proceedings of the …, 2021 - dl.acm.org
… In this work, we present both the methods developed for machine learning-based high-throughput
screening and results from using our computational pipeline to find SARS-CoV-2 …

Lead discovery of SARS-CoV-2 main protease inhibitors through covalent docking-based virtual screening

G Amendola, R Ettari, S Previti, C Di Chio… - Journal of Chemical …, 2021 - ACS Publications
virtual screening campaign against the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-…
silico screening of large chemical libraries of potential covalent binders against the …

Structure-based virtual screening, molecular dynamics and binding affinity calculations of some potential phytocompounds against SARS-CoV-2

SR Naik, P Bharadwaj, N Dingelstad… - Journal of …, 2022 - Taylor & Francis
… Our structure-based virtual screening identified five phytocompounds that could plausibly
bind within the catalytic site of 3CLpro in SARS-CoV-2. The molecular docking and scoring …

Potential inhibitors for novel coronavirus protease identified by virtual screening of 606 million compounds

A Fischer, M Sellner, S Neranjan, M Smieško… - International journal of …, 2020 - mdpi.com
… All top-ranked compounds obtained from our virtual screening process show an improved
ligand efficieny compared to N3 (Table 1). The ligand efficiency of CP-12 (−3.7 kcal/mol) was …

Finding potent inhibitors against SARS-CoV-2 main protease through virtual screening, ADMET, and molecular dynamics simulation studies

R Roy, MF Sk, NA Jonniya, S Poddar… - Journal of Biomolecular …, 2022 - Taylor & Francis
… pro by screening 1.3 billion compounds from the ZINC15 library. In the current study, we
have further screened these 1000 compounds using structure-based virtual screening utilizing …

Promising antivirals for PLpro of SARS-CoV-2 using virtual screening, molecular docking, dynamics, and MMPBSA

R Kumari, V Kumar, P Dhankhar… - Journal of Biomolecular …, 2023 - Taylor & Francis
… from Selleckchem and ChemFaces databases were screened at the catalytic site and
ISG15/Ub-S1 binding allosteric site of PLpro. The virtual screening was done using AutoDock Vina …