A dnaN Plasmid Shuffle Strain for Rapid In Vivo Analysis of Mutant Escherichia coli β Clamps Provides Insight Into the Role of Clamp in umuDC-Mediated Cold …

VMP Babu, MD Sutton - PLoS One, 2014 - journals.plos.org
coli strains and plasmid DNAs used in this study are noted in Table 1. Strains were constructed
using P1vir-mediated generalized transduction [50], λRed-mediated recombination [51], …

[PDF][PDF] A dnaN Plasmid Shuffle Strain for Rapid In Vivo Analysis of Mutant Escherichia coli b Clamps Provides Insight Into the Role

VMP Babu, MD Sutton - 2014 - academia.edu
… form of clamp rather than the homodimeric mutant [6,49]. The dnaN plasmid shuffle assay
described in this report will not only circumvent this issue, but also provides a rapid

[PDF][PDF] A dnaN Plasmid Shuffle Strain for Rapid In Vivo Analysis of Mutant Escherichia coli β Clamps Provides Insight Into the...

V Babu, MD Sutton - 2014 - academia.edu
… form of clamp rather than the homodimeric mutant [6,49]. The dnaN plasmid shuffle assay
described in this report will not only circumvent this issue, but also provides a rapid

Identification of β Clamp-DNA Interaction Regions That Impair the Ability of E. coli to Tolerate Specific Classes of DNA Damage

MT Nanfara, VMP Babu, MA Ghazy, MD Sutton - PLoS One, 2016 - journals.plos.org
… Bacterial strains and plasmid DNAs used in this study are … shuffle assay to measure the
respective abilities of mutant β … double mutant strains expressing the mutant dnaN alleles …

Sliding clamp–DNA interactions are required for viability and contribute to DNA polymerase management in Escherichia coli

JMH Heltzel, SKS Ponticelli, LH Sanders… - Journal of Molecular …, 2009 - Elsevier
mutant β clampplasmid pJD100 that expresses physiological levels of dnaN + .19, 28 We
then asked whether viability of this strain was dependent on the plasmid-expressed β + clamp

Elevated Levels of the Escherichia coli nrdAB-Encoded Ribonucleotide Reductase Counteract the Toxicity Caused by an Increased Abundance of the β Clamp

VMP Babu, C Homiski, MK Scotland… - Journal of …, 2021 - Am Soc Microbiol
… altered in the dnaN E202K mutant compared with a dnaN + strain. For … , Δhda strains rapidly
acquire suppressor mutations that both … Using these plasmid-bearing strains, we previously …

[图书][B] Characterization of Hda-beta clamp functions beyond the regulatory inactivation of DnaA in Escherichia coli

JC Baxter - 2013 - search.proquest.com
… the mutant dnaN159 strain, which expresses the ß159 clamp … and dnaN mutants bearing
the G174A mutation demonstrate … Using a plasmid shuffle assay as illustrated in Figure 2.5, I …

The Mutant βE202K Sliding Clamp Protein Impairs DNA Polymerase III Replication Activity

C Homiski, MK Scotland, VMP Babu… - Journal of …, 2021 - Am Soc Microbiol
… level of the β clamp impedes Escherichia coli growth by … a low copy number plasmid using
a plasmid shuffle assay (32… in vivo, we compared this mutant to the isogenic dnaN + strain by …

The sliding clamp tethers the endonuclease domain of MutL to DNA

MC Pillon, VMP Babu, JR Randall, J Cai… - Nucleic acids …, 2015 - academic.oup.com
… a mild mutator phenotype in Escherichia coli, but completely … β (VB100) and cysteine-modified
β (VB101) shuffle strains. … and β-clamp, as well as the double mutant, conferred mutation

[HTML][HTML] Hda, a novel DnaA‐related protein, regulates the replication cycle in Escherichia coli

J Kato, T Katayama - The EMBO journal, 2001 - embopress.org
… DnaA with the β‐subunit sliding clamp to promote hydrolysis … mutation was transferred by
P1 phage‐mediated transduction into a strain with or without the hda‐complementing plasmid