… We observed ~99% completeness of the genome as measured by BUSCO analysis, and 98… marinagenomeassembled in this study as nearly complete and a reference-grade genome…
D Ma, Q Ding, Z Guo, C Xu, P Liang, Z Zhao, S Song… - Planta, 2022 - Springer
… genome of the Avicenniamarina, a typical true mangrove with a size of 480.43 Mb, contig N50 of 11.33 Mb and 30,956 annotated … We acquired a high-qualitygenome at chromosome-…
… and analysis showed a complete chloroplast genome of 150,279 bp… Graymangroves have been divided into categories based on their … were used for mapping only highquality reads. …
… 23,978 (92.09%) were functionally annotated and 17,598 (67.59%) … high-qualitygenome assembly along with its annotation data will be of interest to researchers studying mangrove …
…, International Mangrove Consortium… - National science …, 2020 - academic.oup.com
… From the site-convergence analysis, we conclude that the … with the genome-sequencing data of Avicenniamarina var. … each mangrove lineage (Sonneratia, Rhizophoreae and Avicennia…
X Feng, G Li, W Wu, H Lyu, J Wang, C Liu… - Marine Life Science & …, 2023 - Springer
… species Avicenniamarina. Comparative genomicanalysis showed that two recent whole-genome … Recently, we also denovoassembledhigh-quality reference genomes of six other …
… In this study, we present a high-qualityassembly of the C. zippeliana … Short-read RNA sequences were mapped to the assembly during the initial step of annotation using the PASA2 …
… Our characterization of the expressed functions was facilitated by the reference genome and coding sequenceannotations [7]. In addition, we used the high-quality reference genome …
… Bootstrap values are labeled with gray solid circles … - and high-quality prokaryotic MAGs and 9 710 assembled fungal contigs, … In summary, these results highlight the predominant role of …