Allosteric communication in the KIX domain proceeds through dynamic repacking of the hydrophobic core

S Brüschweiler, R Konrat, M Tollinger - ACS chemical biology, 2013 - ACS Publications
ACS chemical biology, 2013ACS Publications
The KIX domain of the transcriptional coactivator CREB binding protein (CBP) co-operatively
mediates interactions between transcription factors. Binding of the transcription factor mixed-
lineage leukemia (MLL) induces the formation of a low-populated conformer of KIX that
resembles the conformation of the KIX domain in the presence of a second transcription
factor molecule. NMR spin relaxation studies have previously shown that allosteric coupling
proceeds through a network of hydrophobic core residues that bridge the two binding sites …
The KIX domain of the transcriptional coactivator CREB binding protein (CBP) co-operatively mediates interactions between transcription factors. Binding of the transcription factor mixed-lineage leukemia (MLL) induces the formation of a low-populated conformer of KIX that resembles the conformation of the KIX domain in the presence of a second transcription factor molecule. NMR spin relaxation studies have previously shown that allosteric coupling proceeds through a network of hydrophobic core residues that bridge the two binding sites. Here we describe high-resolution NMR solution structures of the binary complex of KIX with MLL and the ternary complex of KIX formed with MLL and phosphorylated kinase inducible domain of CREB (pKID) as a second ligand. We show that binding of pKID to the binary complex of KIX with MLL is accompanied by a defined repacking of the allosteric network in the hydrophobic core of the protein. Rotamer populations derived from methyl group 13C chemical shifts reveal a dynamic contribution to the repacking process that is not captured by the structural coordinates and exemplify the dynamic nature of allosteric communication in the KIX domain.
ACS Publications
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