An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

JK Eng, AL McCormack, JR Yates - … society for mass spectrometry, 1994 - ACS Publications
… The approach described in this manuscript provides a convenient method to interpret
tandem mass spectra with known sequences in a protein database. …

Statistical models for protein validation using tandem mass spectral data and protein amino acid sequence databases

RG Sadygov, H Liu, JR Yates - Analytical chemistry, 2004 - ACS Publications
peptide sequences to experimental tandem mass spectra. Here … method to assess
closeness of fit between peptide sequence … In this paper, we test the method using cross-correlation

Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databases

JR Yates, JK Eng, AL McCormack - Analytical chemistry, 1995 - ACS Publications
… In the method presented in this paper, no information beyond the mass of the peptide and
… The amino acid sequences for which tandem mass spectra were matched in this region are …

The H-Index of 'an approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database'

MP Washburn - … of The American Society for Mass Spectrometry, 2015 - ACS Publications
… organisms were being sequenced, protein and peptide mass spectrometry was growing into
… the analysis of tandem mass spectrometry data. This commentary provides an analysis of …

[PDF][PDF] An approach to correlate tandem mass spectral data of peptides with amino acid….…

J Eng, A McCormack, J Yatesâ - Society for Mass Spectrometry, 1994 - academia.edu
… The approach described in this manuscript provides a convenient method to interpret tandem
mass spectra … The tandem mass spectrometer sequencing approach has been successfully …

Quality assessment of peptide tandem mass spectra

FX Wu, P Gagné, A Droit, GG Poirier - BMC bioinformatics, 2008 - Springer
… a novel method to assess the quality of tandem mass spectra, … to the amino sequence of
the peptide. In practice, no … These features may be classified into four categories: amino acid

Protein identification by tandem mass spectrometry and sequence database searching

AI Nesvizhskii - Mass Spectrometry Data Analysis in Proteomics, 2007 - Springer
… into peptides and sequencing them using tandem massapproaches and computational
tools for validating peptide … /MS spectrum allows identification of the amino acid sequence

Identification of peptide oxidation by tandem mass spectrometry

KL Schey, EL Finley - Accounts of chemical research, 2000 - ACS Publications
… for sequencing using tandem mass spectrometry is now … of oxygen atoms to susceptible
amino acids in a peptide (eg, … The tandem mass spectrometry approach has been used to …

Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book

RG Sadygov, D Cociorva, JR Yates III - Nature methods, 2004 - nature.com
… of the amino acids and sequences of the peptide 28,29 . … variation of this approach to determine
peptide ion charge state … number of sequences analyzed in the correlation analysis. S p …

Peptide identification from mixture tandem mass spectra

J Wang, J Pérez-Santiago, JE Katz, P Mallick… - Molecular & Cellular …, 2010 - ASBMB
approach to correlate tandem mass-spectral data of peptides with amino acid sequences in
… a computational approach, M-SPLIT (mixture-spectrum partitioning using library of identified …