CAT: a computational anatomy toolbox for the analysis of structural MRI data

C Gaser, R Dahnke, PM Thompson, F Kurth… - …, 2024 - academic.oup.com
Computational Anatomy Toolbox (CAT)—a powerful suite of tools for brain morphometric
analysesCAT is suitable for beginners, casual users, experts, and developers alike, providing …

[PDF][PDF] Structural MRI and computational anatomy

F Hoffstaedter, G Antonopoulos… - Methods for Analyzing …, 2024 - library.oapen.org
… reproducible neuroimaging analyses. This chapter demonstrates reproducible processing
using the CAT12 (Computational Anatomy Toolbox) … io/cat) extension to SPM12 (www. fil. ion. …

Variations in structural MRI quality significantly impact commonly used measures of brain anatomy

AD Gilmore, NJ Buser, JL Hanson - Brain informatics, 2021 - Springer
Computational Anatomy Toolbox for SPM (CAT12) assesses multiple image quality metrics
and provides an aggregate “grade” for a given structural MRI … morphometric output category (…

… of customised tissue probability maps and templates for patients with idiopathic normal pressure hydrocephalus: a computational anatomy toolbox (CAT12) study

S Kanno, J Liu, A Kawamura, S Ota… - Fluids and Barriers of …, 2024 - Springer
… This study aimed to develop and validate methods of accurate brain segmentation and …
CAT: a computational anatomy toolbox for the analysis of structural MRI data. Gigascience. …

Comparing CAT12 and VBM8 for detecting brain morphological abnormalities in temporal lobe epilepsy

F Farokhian, I Beheshti, D Sone, H Matsuda - Frontiers in neurology, 2017 - frontiersin.org
… a VBM analysis using the Computational Anatomy Toolbox (… by a VBM analysis using the
VBM8 toolbox implemented in the … Anatomy Toolbox (CAT) for performing comprehensive VBM …

Evaluation of brain structure abnormalities in children with autism spectrum disorder (ASD) using structural magnetic resonance imaging

ZK Khadem-Reza, H Zare - The Egyptian Journal of Neurology, Psychiatry …, 2022 - Springer
… examining the structural abnormalities … study is evaluation of brain structure abnormalities
in children with autism spectrum disorder (ASD) using structural magnetic resonance imaging (…

Cortical thickness estimations of FreeSurfer and the CAT12 toolbox in patients with Alzheimer's disease and healthy controls

R Seiger, S Ganger, GS Kranz, A Hahn… - Journal of …, 2018 - Wiley Online Library
… The FreeSurfer software is frequently applied for this type of analysis. The computational
anatomy toolbox (CAT12) for SPM, which offers a fast and easy-to-use alternative approach, …

[HTML][HTML] Cortical thickness in brain imaging studies using FreeSurfer and CAT12: A matter of reproducibility

MFM Dias, P Carvalho, M Castelo-Branco… - Neuroimage: Reports, 2022 - Elsevier
… implementation to pre-process MRI data and extract brain tissue … This study assesses the
cortical thickness estimation's … : FreeSurfer and Computational Anatomy Toolbox (CAT12). The …

Repeatability and reproducibility of FreeSurfer, FSL-SIENAX and SPM brain volumetric measurements and the effect of lesion filling in multiple sclerosis

C Guo, D Ferreira, K Fink, E Westman, T Granberg - European radiology, 2019 - Springer
… and subcortical structures. SIENAX, part of the FMRIB Software Library (FSL), is computationally
less … Computational Anatomy Toolbox (SPM-CAT) is an extension for SPM that provides …

Cortical and subcortical morphometric changes in patients with frontal focal cortical dysplasia type II

B Genç, A Aksoy, K Aslan - Neuroradiology, 2024 - Springer
… VBM and SBM analyses were conducted using Computational Anatomy Toolbox 12.8 (…
Computational Anatomy Toolbox 12.8 (CAT 12.8), in conjunction with Statistical Parametric …