B Wang, M Hou, J Shi, L Ku, W Song, C Li, Q Ning… - Nature Genetics, 2023 - nature.com
… through assembly and comparativeanalyses of high-quality genome of 12 key FILs of various … and annotation of high-quality genomes for 26 NAM founder lines 30 , should not only …
… Here, we present a denovoassembly of a sweet corn inbred … six field corngenomes was defined using OrthoMCL 26 . We … genes using pairwise comparativeanalysis of the sweet corn …
J Zhou, M Xu - Maize Genomics and Genetics, 2024 - cropscipublisher.com
… In comparativemaizegenomics, various types of genomic … in both contig length and annotation quality, with over 130 000 … Comparativeanalyses using RNA-Seq data have revealed …
… based on comparativeanalysis of several high-quality great ape … To perform a denovo assembly of the SK genome, we … data for RNA polymerase II 26 to the SK genomeassembly, and …
S Sen, SK King, T McCubbin, LA Greeley, RA Mertz… - Scientific Reports, 2023 - nature.com
… reference genome, enabling variouscomparativestudies with … (plants) along with AUGUSTUS 26 species “maize”, and the … an annotateddenovo transcriptome assembly resource to …
G Lin, C He, J Zheng, DH Koo, H Le, H Zheng… - Genome biology, 2021 - Springer
… by FISH [25, 26], supporting the large-scale correctness of A188Ref1. … The Maker genome annotation resulted in 40,747 high-… Transcriptomic data were generated for 11 diverse tissues …
… diversity is important for the continued improvement of maize, … [25], followed by running the assembly tool Pilon [26] (v1.22) … sequence assemblies, the availability of denovoassembled …
T Li, S Xu, J Zhao, Y Wang, J Zhang, X Wei, J Qu, R Yu… - The Crop Journal, 2023 - Elsevier
… The high-quality genomeassemblies of 26diverse parents … A denovo repeat library in KA105 was constructed with … Gene annotation of the KA105 genome was performed with a …
… of variation and comparativeanalyses within genic regions. … difficulties in genomeassembly and annotation to deal with … such as maize would have a larger dispensable genome than …