Dynamics of posttranslational modification systems: Recent progress and future directions

C Conradi, A Shiu - Biophysical journal, 2018 - cell.com
Biophysical journal, 2018cell.com
Posttranslational modification of proteins is important for signal transduction, and hence
significant effort has gone toward understanding how posttranslational modification
networks process information. This involves, on the theory side, analyzing the dynamical
systems arising from such networks. Which networks are, for instance, bistable? Which
networks admit sustained oscillations? Which parameter values enable such behaviors? In
this Biophysical Perspective, we highlight recent progress in this area and point out some …
Abstract
Posttranslational modification of proteins is important for signal transduction, and hence significant effort has gone toward understanding how posttranslational modification networks process information. This involves, on the theory side, analyzing the dynamical systems arising from such networks. Which networks are, for instance, bistable? Which networks admit sustained oscillations? Which parameter values enable such behaviors? In this Biophysical Perspective, we highlight recent progress in this area and point out some important future directions. Along the way, we summarize several techniques for analyzing general networks, such as eliminating variables to obtain steady-state parameterizations, and harnessing results on how incorporating intermediates affects dynamics.
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