Y Liu, XS Liu, L Wei, RB Altman… - Genome Research, 2004 - genome.cshlp.org
… for identification of eukaryotic regulatoryelements. In this paper, we presented a … analysis of the conservation of known regulatoryelements in human and S. cerevisiae by comparison …
… of conservedregulatoryelements were identified between … genome is the smallest among these model fish genomes,(57… genome for identifyingconserved gene regulatoryelements in …
… (2003) we used a comparativegenomics approach to … to identifyregulatoryelements based on their conservation patterns across all intergenic regions and the complete genome. The …
O Elemento, S Tavazoie - Genome biology, 2005 - Springer
… for discovering globally conservedregulatoryelements between two genomes. The method is … -scale comparativegenomics approaches for finding transcriptional regulatoryelements …
T Dickmeis, F Müller - Briefings in Functional Genomics, 2005 - academic.oup.com
… identifyingconservedregulatoryelements of developmental genes by comparativegenomics… This review focusses on the use of comparativegenomics for the identification of cis-acting …
… non-coding sequences identified many of the known regulatoryelements … identified most of the known regulatoryelements (Table 3), whereas previously defined criteria (10) identified …
… Robust algorithms for comparativegenomics are expected to gain in power … conserved within all organisms. The branch length score (BLS) was developed to quantify motif conservation …
A Prakash, M Tompa - Nature biotechnology, 2005 - nature.com
… In contrast, we compare various tools for their ability to identifyregulatoryelements and … 6 also identifies regulatoryelements in human and mouse using a genome-wide analysis. …
S Prabhakar, F Poulin, M Shoukry, V Afzal… - Genome …, 2006 - genome.cshlp.org
… identified cis-regulatoryelements at diverse genomic loci and also tested numerous extremely conserved … Human regulatoryelements were identified with acceptable sensitivity (53%–…