Energy landscapes and functions of supramolecular systems

F Tantakitti, J Boekhoven, X Wang, RV Kazantsev… - Nature materials, 2016 - nature.com
… —we show that the minima in the energy landscapes of supramolecular systems are defined
by … the position of the final product in the energy landscape. Within the same … Full size image

Energy landscape analysis of neuroimaging data

T Ezaki, T Watanabe, M Ohzeki… - … Transactions of the …, 2017 - royalsocietypublishing.org
… approach to neuroimaging data called the energy landscape analysis. The methods are …
Then, we apply the methods to functional magnetic resonance imaging data recorded from …

Imaging energy landscapes with concentrated diffusing colloidal probes

P Bahukudumbi, MA Bevan - The Journal of chemical physics, 2007 - pubs.aip.org
… To investigate the use of DCPs to image energy landscapes, we first microfabricated a model
surface pattern consisting of an array of nearly harmonic potential wells. Quick exposure of …

Imaging G protein–coupled receptors while quantifying their ligand-binding free-energy landscape

D Alsteens, M Pfreundschuh, C Zhang, PM Spoerri… - Nature …, 2015 - nature.com
… Determining the free-energy landscape parameters To quantify the free-energy landscape
of … of single ligand-receptor bonds quantitate the ligand-binding energy landscape of PAR1. …

Single-molecule imaging of DNA curtains reveals intrinsic energy landscapes for nucleosome deposition

ML Visnapuu, EC Greene - Nature structural & molecular biology, 2009 - nature.com
… Here we use this assay to determine the coarse-grained energy landscapes for nucleosome
… in dictating the landscape. We also map the intrinsic landscape for nucleosome deposition …

From valleys to ridges: exploring the dynamic energy landscape of single membrane proteins

H Janovjak, KT Sapra, A Kedrov… - … : a European journal of …, 2008 - Wiley Online Library
… described by dynamic energy landscapes. The conceptual energy landscape allows to follow
… Here we review how SMFS extracts the defining parameters of an energy landscape such …

Energy landscapes of receptor–ligand bonds explored with dynamic force spectroscopy

R Merkel, P Nassoy, A Leung, K Ritchie, E Evans - Nature, 1999 - nature.com
… barriers traversed in the energy landscape along the force-… the shape of the energy
landscape derived from simulations of … regime produces an image of a sharp energy barrier at a …

Moiré metrology of energy landscapes in van der Waals heterostructures

D Halbertal, NR Finney, SS Sunku, A Kerelsky… - Nature …, 2021 - nature.com
… To study the energy landscape of TBG, we focus on the interplay between SDW and DDW …
image To quantify how the observed moiré networks constrain the stacking energy landscape, …

Detecting ligand-binding events and free energy landscape while imaging membrane receptors at subnanometer resolution

M Pfreundschuh, D Harder, Z Ucurum, D Fotiadis… - Nano …, 2017 - ACS Publications
… -binding free energy landscape from the … imaging receptors in native membranes at
subnanometer resolution and for systematically mapping and quantifying the free energy landscape

Complex energy landscapes of self-assembled vesicles

J Luan, D Wang, S Zhang, Y Miyazaki… - Journal of the …, 2023 - ACS Publications
… Cryo-TEM images of self-assemblies as vitrified at indicated temperatures during the first
heating/cooling cycle. (a) Vesicles self-assembled from Janus dendrimers with half the methoxy …