A mixed MgF2–MgO system has been tested as a potential support of iridium catalysts in the hydrodesulfurization of thiophene. Samples of MgF2–MgO with different contents of MgO (0–100%) have been prepared by one-step sol–gel method in the reaction of magnesium methoxide dissolved in methanol with hydrofluoric acid. They have been used as supports for the synthesis of iridium (1 wt% Ir) catalysts. The supports have been characterized by XRD, low temperature nitrogen adsorption and thermogravimetric measurements. The one-step method of MgF2–MgO synthesis has been shown to permit the control of MgO content in the mixed system. The MgF2–MgO samples are classified as mesoporous, of large surface area (100–450 m2 g−1) depending on the amount of MgO introduced, with the maximum for 71 mol% MgO. The presence of two phases in the mixture delays the process of both MgF2 and MgO crystallization and increases the resistance of the MgF2–MgO texture to treatment at temperatures up to 800 °C. The catalysts obtained by deposition of the iridium phase on MgF2, MgO and MgF2–MgO (62 mol% MgO) calcined at 400–700 °C, have been tested in the reaction of hydrodesulfurization of thiophene. The most active has been the iridium catalyst supported on MgF2–MgO.