VK Misra, DE Draper - Biopolymers: Original Research on …, 1998 - Wiley Online Library
… We survey a number of specific systems in which Mg2 –RNA … an RNA in a mixed salt (eg, MgCl2 and NaCl) solution as30 … concentration of Na along with a fixed concentration of Mg2. …
… different ratios of Na+/Mg2+ on RNA duplex stability. Optical … to predict RNAstability in mixedNa+/Mg2+ solutions. In this … when [Mg2+] is comparable to [Na+] that helixstability will …
K Xi, FH Wang, G Xiong, ZL Zhang, ZJ Tan - Biophysical journal, 2018 - cell.com
… in mixed divalent/monovalent ion solutions with desired bulk ion concentrations via molecular dynamics (MD) simulations and investigated the competitive binding of Mg 2+ /Na + … RNA …
D Coman, IM Russu - Nucleic acids research, 2004 - academic.oup.com
… Na + counterions were replaced with Mg 2+ . The exchange rates of imino protons were measured for a solution of this triple helix … of Mg2+ ions (A) and in the presence of 100 mM Mg2+ …
AM Soto, V Misra, DE Draper - Biochemistry, 2007 - ACS Publications
… Although is defined in terms of molal quantities, the solutions … suggests that BWYV RNA folds into a stable pseudoknot at Na + … in the unfolding of Helix 1 in BWYV RNA, whereas the T M …
L Jin, YZ Shi, CJ Feng, YL Tan, ZJ Tan - Biophysical Journal, 2018 - cell.com
… ) RNAs play essential roles in many processes of cell metabolism. The knowledge of three-dimensional (3D) structure, stability, and flexibility of dsRNAs in salt solutions is … , stability, …
… with RNA/DNA, such as the tendency to form A-type helices and a … for Na+, in terms of equivalent sodium concentration and … cations Mg2+, as well as mixed mono- and divalent Mg2++K…
… To answer questions about the effects of ions on RNAstability, a coherent framework based … -stranded poly(U) to a double-helicalRNA is because of the closer phosphate–phosphate …
P Sehdev, G Crews, AM Soto - Biochemistry, 2012 - ACS Publications
… –loop complexes where two RNA hairpins interact through … were extensively equilibrated in the appropriate solution … between the Na + and Mg 2+ complexes: the Na + complexes show …