Regulation of RNA editing by intracellular acidification

TN Malik, EE Doherty, VM Gaded, TM Hill… - Nucleic acids …, 2021 - academic.oup.com
TN Malik, EE Doherty, VM Gaded, TM Hill, PA Beal, RB Emeson
Nucleic acids research, 2021academic.oup.com
The hydrolytic deamination of adenosine-to-inosine (A-to-I) by RNA editing is a widespread
post-transcriptional modification catalyzed by the a denosine dea minase acting on R NA
(ADAR) family of proteins. ADAR-mediated RNA editing modulates cellular pathways
involved in innate immunity, RNA splicing, RNA interference, and protein recoding, and has
been investigated as a strategy for therapeutic intervention of genetic disorders. Despite
advances in basic and translational research, the mechanisms regulating RNA editing are …
Abstract
The hydrolytic deamination of adenosine-to-inosine (A-to-I) by RNA editing is a widespread post-transcriptional modification catalyzed by the adenosine deaminase acting on RNA (ADAR) family of proteins. ADAR-mediated RNA editing modulates cellular pathways involved in innate immunity, RNA splicing, RNA interference, and protein recoding, and has been investigated as a strategy for therapeutic intervention of genetic disorders. Despite advances in basic and translational research, the mechanisms regulating RNA editing are poorly understood. Though several trans-acting regulators of editing have been shown to modulate ADAR protein expression, previous studies have not identified factors that modulate ADAR catalytic activity. Here, we show that RNA editing increases upon intracellular acidification, and that these effects are predominantly explained by both enhanced ADAR base-flipping and deamination rate at acidic pH. We also show that the extent of RNA editing increases with the reduction in pH associated with conditions of cellular hypoxia.
Oxford University Press
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