The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data
… In summary, the cBio portal facilitates access to cancer genomic data sets for the entire
biomedical community. It provides a simple yet flexible interface to integrated data sets, intuitive …
biomedical community. It provides a simple yet flexible interface to integrated data sets, intuitive …
Visualizing multidimensional cancer genomics data
… well suited to the exploration of multidimensional cancer genomics data. Its interactive …
cBio Cancer Genomics Portal [32], IntOGen [33] and Regulome Explorer [70]. Open source …
cBio Cancer Genomics Portal [32], IntOGen [33] and Regulome Explorer [70]. Open source …
caOmicsV: an R package for visualizing multidimensional cancer genomic data
H Zhang, PS Meltzer, SR Davis - BMC bioinformatics, 2016 - Springer
… [8–10] help in exploring relationships between genomic alterations or … open source tool
used in cancer research community for statistical analysis and visualization of cancer genomic …
used in cancer research community for statistical analysis and visualization of cancer genomic …
[HTML][HTML] Oncogenomic portals for the visualization and analysis of genome-wide cancer data
K Klonowska, K Czubak, M Wojciechowska… - Oncotarget, 2016 - ncbi.nlm.nih.gov
… Since the initiation of large-scale cancer genomic projects (eg, the Cancer Genome Project,
… oncogenomic projects is crucial to exploring the multidimensional character of genome-wide …
… oncogenomic projects is crucial to exploring the multidimensional character of genome-wide …
Integration of online omics-data resources for cancer research
… -data resources such as The Cancer Genome Atlas (TCGA) … Examples of multidimensional
online data portals and … exploration opportunity of the somatic mutational landscape of the …
online data portals and … exploration opportunity of the somatic mutational landscape of the …
Multiomic integration of public oncology databases in bioconductor
… The open source curatedTCGAData pipeline is available … Cancer Genomics 26 is an
open access resource and open source platform for interactive and programmatic exploration …
open access resource and open source platform for interactive and programmatic exploration …
Analysis and visualization of longitudinal genomic and clinical data from the AACR project GENIE biopharma collaborative in cBioPortal
… Atlas (TCGA) dataset and other large-scale cancer genomic data. … view for the interactive
exploration of genomic and clinical data in … Multidimensional GENIE BPC datasets have been …
exploration of genomic and clinical data in … Multidimensional GENIE BPC datasets have been …
TCGAbiolinksGUI: A graphical user interface to analyze cancer molecular and clinical data
… , download and prepare cancer genomics data for integrative … , TCGAbiolinksGUI offers an
open platform which improves … analyzing and discovering new functional genomic elements …
open platform which improves … analyzing and discovering new functional genomic elements …
Integration and Analysis of CPTAC Proteomics Data in the Context of Cancer Genomics in the cBioPortal*[S]
P Wu, ZJ Heins, JT Muller, L Katsnelson… - Molecular & Cellular …, 2019 - ASBMB
… in the context of the clinical and genomics data from the same tumors. cBioPortal is an open
source platform for exploring, visualizing, and analyzing multidimensional cancer genomics …
source platform for exploring, visualizing, and analyzing multidimensional cancer genomics …
TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas
… genomic abnormalities in several cancer types including data from TCGA. The cBio Cancer
Genomics Portal [17] is an open… and download of multidimensional cancer genomic data sets …
Genomics Portal [17] is an open… and download of multidimensional cancer genomic data sets …