The coordinated action of the enzymes in the L-lysine biosynthetic pathway and how to inhibit it for antibiotic targets

S Muduli, S Karmakar, S Mishra - Biochimica et Biophysica Acta (BBA) …, 2023 - Elsevier
Biochimica et Biophysica Acta (BBA)-General Subjects, 2023Elsevier
Background Antimicrobial resistance is a global health issue that requires immediate
attention in terms of new antibiotics and new antibiotic targets. The l-lysine biosynthesis
pathway (LBP) is a promising avenue for drug discovery as it is essential for bacterial growth
and survival and is not required by human beings. Scope of review The LBP involves a
coordinated action of fourteen different enzymes distributed over four distinct sub-pathways.
The enzymes involved in this pathway belong to different classes, such as aspartokinase …
Background
Antimicrobial resistance is a global health issue that requires immediate attention in terms of new antibiotics and new antibiotic targets. The l-lysine biosynthesis pathway (LBP) is a promising avenue for drug discovery as it is essential for bacterial growth and survival and is not required by human beings.
Scope of review
The LBP involves a coordinated action of fourteen different enzymes distributed over four distinct sub-pathways. The enzymes involved in this pathway belong to different classes, such as aspartokinase, dehydrogenase, aminotransferase, epimerase, etc. This review provides a comprehensive account of the secondary and tertiary structure, conformational dynamics, active site architecture, mechanism of catalytic action, and inhibitors of all enzymes involved in LBP of different bacterial species.
Major conclusions
LBP offers a wide scope for novel antibiotic targets. The enzymology of a majority of the LBP enzymes is well understood, although these enzymes are less widely studied in the critical pathogens (according to the 2017 WHO report) that require immediate attention. In particular, the enzymes in the acetylase pathway, DapAT, DapDH, and Aspartokinase in critical pathogens have received little attention. High throughput screening for inhibitor design against the enzymes of lysine biosynthetic pathway is rather limited, both in number and in the extent of success.
General significance
This review can serve as a guide for the enzymology of LBP and help in identifying new drug targets and designing potential inhibitors.
Elsevier
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