Theoretical modeling of multiprotein complexes by iSPOT: Integration of small-angle X-ray scattering, hydroxyl radical footprinting, and computational docking

W Huang, KM Ravikumar, M Parisien, S Yang - Journal of structural biology, 2016 - Elsevier
Structural determination of protein-protein complexes such as multidomain nuclear
receptors has been challenging for high-resolution structural techniques. Here, we present a
combined use of multiple biophysical methods, termed iSPOT, an integration of shape
information from small-angle X-ray scattering (SAXS), protection factors probed by hydroxyl
radical footprinting, and a large series of computationally docked conformations from rigid-
body or molecular dynamics (MD) simulations. Specifically tested on two model systems, the …
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