ModDotPlot—rapid and interactive visualization of tandem repeats

AP Sweeten, MC Schatz, AM Phillippy - Bioinformatics, 2024 - academic.oup.com
Motivation A common method for analyzing genomic repeats is to produce a sequence
similarity matrix visualized via a dot plot. Innovative approaches such as StainedGlass have …

MoFi: A software tool for annotating glycoprotein mass spectra by integrating hybrid data from the intact protein and glycopeptide level

W Skala, T Wohlschlager, S Senn, GE Huber… - Analytical …, 2018 - ACS Publications
Hybrid mass spectrometry (MS) is an emerging technique for characterizing glycoproteins,
which typically display pronounced microheterogeneity. Since hybrid MS combines …

Ultratrace eNose Sensing of VOCs toward Breath Analysis Applications Utilizing an eNose-Based Analyzer

J Glöckler, C Jaeschke, M Padilla… - ACS Measurement …, 2024 - ACS Publications
This proof-of-principle study presents the ability of the recently developed iLovEnose to
measure ultratrace levels of volatile organic compounds (VOCs) in simulated human breath …

[HTML][HTML] Visual assessment of 2-dimensional levels within 3-dimensional pathology data sets of prostate needle biopsies reveals substantial spatial heterogeneity

C Koyuncu, A Janowczyk, X Farre, T Pathak… - Laboratory …, 2023 - Elsevier
… r 3 is a general pathologist with 8 years of experience, and r 4 is a GU pathologist with 17
years of experience. Each human reader was given a task of grading all images using a custom…

An epigenetic clock for Xenopus tropicalis reveals age-associated sites enriched in H4K20me3-marked heterochromatin

R Bennett, M Morselli, L Peshkin, M Pellegrini - bioRxiv, 2024 - biorxiv.org
DNA methylation clocks have been widely used for accurate age prediction, but most studies
have been carried out on mammals. Here we present a clock for the aquatic frog Xenopus …

[HTML][HTML] Specific regulation of mechanical nociception by Gβ5 involves GABA-B receptors

M Pandey, JH Zhang, PR Adikaram, C Kittock, N Lue… - JCI insight, 2023 - ncbi.nlm.nih.gov
… The clustering of gene expression patterns in different DRG were analyzed by the UMAP
algorithm (26) employing Has2k1/Plotnine software v0.8.0 that ran on the Jupyter Notebook …

[PDF][PDF] Pseudoregister in Pacoh: Preliminary acoustic analysis and implications for a general model of pseudoregister formation in Austroasiatic

R Gehrmann - JSEALS, 2022 - evols.library.manoa.hawaii.edu
Register is a suprasegmental contrast cued by a combination of voice quality, vowel quality
and pitch found in many languages of Southeast Asia. Conventionally, registers develop …

[引用][C] has2k1/plotnine: v0. 8.0

H Kibirige, G Lamp, J Katins, A Gdowding, austin… - Zenodo. Kubota, Y, 2021

[引用][C] has2k1/plotnine: v0. 8.0

P Contributors - Version v0, 2021

[引用][C] has2k1/plotnine: v0. 8.0 (2021)

H Kibirige - URL https://doi. org/10.5281/zenodo