[HTML][HTML] Cryo-electron microscopy of chromatin biology

MD Wilson, A Costa - Acta Crystallographica Section D: Structural …, 2017 - scripts.iucr.org
The basic unit of chromatin, the nucleosome core particle (NCP), controls how DNA in
eukaryotic cells is compacted, replicated and read. Since its discovery, biochemists have …

Chromatin structure meets cryo-EM: dynamic building blocks of the functional architecture

Y Takizawa, H Kurumizaka - Biochimica et Biophysica Acta (BBA)-Gene …, 2022 - Elsevier
Chromatin is a dynamic molecular complex composed of DNA and proteins that package the
DNA in the nucleus of eukaryotic cells. The basic structural unit of chromatin is the …

Structures of native-like nucleosomes: One step closer toward understanding the structure and function of chromatin

Y Bai, BR Zhou - Journal of molecular biology, 2021 - Elsevier
Genomic DNA in eukaryotes is organized into chromatin through association with core
histone proteins to form nucleosomes. To understand the structure and function of …

Cryo-EM of nucleosome core particle interactions in trans

S Bilokapic, M Strauss, M Halic - Scientific reports, 2018 - nature.com
Nucleosomes, the basic unit of chromatin, are repetitively spaced along DNA and regulate
genome expression and maintenance. The long linear chromatin molecule is extensively …

Nucleosome conformational variability in solution and in interphase nuclei evidenced by cryo-electron microscopy of vitreous sections

M Eltsov, D Grewe, N Lemercier… - Nucleic acids …, 2018 - academic.oup.com
In Eukaryotes, DNA is wound around the histone octamer forming the basic chromatin unit,
the nucleosome. Atomic structures have been obtained from crystallography and single …

Structural insights of nucleosome and the 30-nm chromatin fiber

P Zhu, G Li - Current opinion in structural biology, 2016 - Elsevier
Highlights•Structural insights of nucleosome core particles (NCP) and nucleosome–proteins
complexes.•H2A–H2B acidic patch and linker DNAs of NCP provide two main recognition …

Cryo-electron microscopy of the chromatin fiber

R Boopathi, S Dimitrov, A Hamiche, C Petosa… - Current Opinion in …, 2020 - Elsevier
Highlights•Cryo-electro microscopy reveals the native conformation of chromatin fiber both
in vitro and in situ.•Presence of linker histone and ionic conditions determines the level of …

Structural features of nucleosomes in interphase and metaphase chromosomes

Y Arimura, RM Shih, R Froom, H Funabiki - Molecular cell, 2021 - cell.com
Structural heterogeneity of nucleosomes in functional chromosomes is unknown. Here, we
devise the template-, reference-and selection-free (TRSF) cryo-EM pipeline to …

NucleosomeDB-a database of 3D nucleosome structures and their complexes with comparative analysis toolkit

GA Armeev, AK Gribkova, AK Shaytan - bioRxiv, 2023 - biorxiv.org
Nucleosomes are basic building blocks of chromatin, comprising DNA wrapped around an
octamer of eight histone proteins. They play key roles in DNA compaction, epigenetic mark …

Nucleosome and chromatin fiber dynamics

K Luger, JC Hansen - Current opinion in structural biology, 2005 - Elsevier
Chromosomal DNA is packaged into condensed nucleoprotein suprastructures, yet the DNA
can be accessed as needed within this structural context. Recently, progress has been …