Cryo-electron microscopy of the chromatin fiber

R Boopathi, S Dimitrov, A Hamiche, C Petosa… - Current Opinion in …, 2020 - Elsevier
Highlights•Cryo-electro microscopy reveals the native conformation of chromatin fiber both
in vitro and in situ.•Presence of linker histone and ionic conditions determines the level of …

Chromatin structure: does the 30-nm fibre exist in vivo?

K Maeshima, S Hihara, M Eltsov - Current opinion in cell biology, 2010 - Elsevier
A long strand of DNA is wrapped around the core histone and forms a nucleosome.
Although the nucleosome has long been assumed to be folded into 30-nm chromatin fibres …

Chromatin structure meets cryo-EM: dynamic building blocks of the functional architecture

Y Takizawa, H Kurumizaka - Biochimica et Biophysica Acta (BBA)-Gene …, 2022 - Elsevier
Chromatin is a dynamic molecular complex composed of DNA and proteins that package the
DNA in the nucleus of eukaryotic cells. The basic structural unit of chromatin is the …

Chromatin organization re-viewed

CL Woodcock, RA Horowitz - Trends in Cell Biology, 1995 - cell.com
The predominant view of chromatin structure is that the beaded chain of nucleosomes is
folded into a symmetrical helical fibre. Recently, however, direct evidence from cryoelectron …

Chromatin organization—the 30 nm fiber

SA Grigoryev, CL Woodcock - Experimental cell research, 2012 - Elsevier
Despite over 30years of work, the fundamental structure of eukaryotic chromatin remains
controversial. Here, we review the roots of this controversy in disparities between results …

New insights into the helical structure of 30-nm chromatin fibers

P Chen, P Zhu, G Li - 2014 - Springer
In eukaryotic cells, genomic DNA is highly packaged into chromatin to fit inside the nucleus.
The accessibility of DNA is dependent on the packing density of chromatin fibers, which …

Automated Electron Microscope Tomography of Frozen–Hydrated Chromatin: The Irregular Three-Dimensional Zigzag Architecture Persists in Compact, Isolated …

RA Horowitz, AJ Koster, J Walz… - Journal of structural biology, 1997 - Elsevier
The potential of electron microscope tomography as a tool for obtaining three-dimensional
(3D) information about large macromolecular assemblies is greatly extended by automation …

The transition structure of chromatin fibers at the nanoscale probed by cryogenic electron tomography

Z Zhou, K Li, R Yan, G Yu, CJ Gilpin, W Jiang… - Nanoscale, 2019 - pubs.rsc.org
The naked DNA inside the nucleus interacts with proteins and RNAs forming a higher order
chromatin structure to spatially and temporally control transcription in eukaryotic cells. The …

Analysis of chromatin fibers in Hela cells with electron tomography

X Li, H Feng, J Zhang, L Sun, P Zhu - Biophysics reports, 2015 - Springer
The presence and folding pattern of chromatin in eukaryotic cells remain elusive and
controversial. In this study, we prepared ultra-thin sections of Hela cells with three different …

Cryo-ET study from in vitro to in vivo revealed a general folding mode of chromatin with two-start helical architecture

Y Li, H Zhang, X Li, W Wu, P Zhu - Cell Reports, 2023 - cell.com
The organization and dynamics of chromatin fiber play crucial roles in regulating DNA
accessibility for gene expression. Here we combine cryoelectron tomography (cryo-ET), sub …