SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species
A physically anchored consensus map is foundational to modern genomics research;
however, construction of such a map in oat (Avena sativa L., 2 n= 6 x= 42) has been …
however, construction of such a map in oat (Avena sativa L., 2 n= 6 x= 42) has been …
Using genotyping-by-sequencing (GBS) for genomic discovery in cultivated oat
Advances in next-generation sequencing offer high-throughput and cost-effective
genotyping alternatives, including genotyping-by-sequencing (GBS). Results have shown …
genotyping alternatives, including genotyping-by-sequencing (GBS). Results have shown …
The near-complete genome assembly of hexaploid wild oat reveals its genome evolution and divergence with cultivated oats
Q He, W Li, Y Miao, Y Wang, N Liu, J Liu, T Li, Y Xiao… - Nature Plants, 2024 - nature.com
Avena sterilis, the ancestral species of cultivated oats, is a valuable genetic resource for oat
improvement. Here we generated a near-complete 10.99 Gb A. sterilis genome and a high …
improvement. Here we generated a near-complete 10.99 Gb A. sterilis genome and a high …
Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology
RE Oliver, GR Lazo, JD Lutz, MJ Rubenfield, NA Tinker… - BMC genomics, 2011 - Springer
Background Genetic markers are pivotal to modern genomics research; however, discovery
and genotyping of molecular markers in oat has been hindered by the size and complexity of …
and genotyping of molecular markers in oat has been hindered by the size and complexity of …
[图书][B] Oat SNP Marker Discovery and Mapping Based on 454 Pyrosequencing of Genome-Reduced Avena Magna Murphy Et Terrell
RR Redman - 2011 - search.proquest.com
The size and complexity of the oat genomes (Avena L., x= 7) have made genetic studies,
including the discovery of molecular markers, difficult. Recent attention to these species has …
including the discovery of molecular markers, difficult. Recent attention to these species has …
New Diversity Arrays Technology (DArT) markers for tetraploid oat (Avena magna Murphy et Terrell) provide the first complete oat linkage map and markers linked to …
Nutritional benefits of cultivated oat (Avena sativa L., 2 n= 6 x= 42, AACCDD) are well
recognized; however, seed protein levels are modest and resources for genetic …
recognized; however, seed protein levels are modest and resources for genetic …
A SNP genotyping array for hexaploid oat
NA Tinker, S Chao, GR Lazo, RE Oliver… - The Plant …, 2014 - Wiley Online Library
Recognizing a need in cultivated hexaploid oat (Avena sativa L.) for a reliable set of
reference single nucleotide polymorphisms (SNPs), we have developed a 6000 (6K) …
reference single nucleotide polymorphisms (SNPs), we have developed a 6000 (6K) …
A consensus map in cultivated hexaploid oat reveals conserved grass synteny with substantial subgenome rearrangement
Hexaploid oat (Avena sativa L., 2n= 6x= 42) is a member of the Poaceae family and has a
large genome (∼ 12.5 Gb) containing 21 chromosome pairs from three ancestral genomes …
large genome (∼ 12.5 Gb) containing 21 chromosome pairs from three ancestral genomes …
Reference genome assemblies reveal the origin and evolution of allohexaploid oat
Common oat (Avena sativa) is an important cereal crop serving as a valuable source of
forage and human food. Although reference genomes of many important crops have been …
forage and human food. Although reference genomes of many important crops have been …
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for …
Advances in genome sequencing and assembly technologies are generating many high-
quality genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …
quality genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …