Reference genome assemblies reveal the origin and evolution of allohexaploid oat

Y Peng, H Yan, L Guo, C Deng, C Wang, Y Wang… - Nature Genetics, 2022 - nature.com
Common oat (Avena sativa) is an important cereal crop serving as a valuable source of
forage and human food. Although reference genomes of many important crops have been …

The mosaic oat genome gives insights into a uniquely healthy cereal crop

N Kamal, N Tsardakas Renhuldt, J Bentzer… - Nature, 2022 - nature.com
Cultivated oat (Avena sativa L.) is an allohexaploid (AACCDD, 2 n= 6 x= 42) thought to have
been domesticated more than 3,000 years ago while growing as a weed in wheat, emmer …

Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species

PJ Maughan, R Lee, R Walstead, RJ Vickerstaff… - Bmc Biology, 2019 - Springer
Abstract Background Cultivated hexaploid oat (Common oat; Avena sativa) has held a
significant place within the global crop community for centuries; although its cultivation has …

Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding

JM Aury, S Engelen, B Istace, C Monat… - …, 2022 - academic.oup.com
Background The sequencing of the wheat (Triticum aestivum) genome has been a
methodological challenge for many years owing to its large size (15.5 Gb), repeat content …

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for …

BJ Clavijo, L Venturini, C Schudoma… - Genome …, 2017 - genome.cshlp.org
Advances in genome sequencing and assembly technologies are generating many high-
quality genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …

Genome of an allotetraploid wild peanut Arachis monticola: a de novo assembly

D Yin, C Ji, X Ma, H Li, W Zhang, S Li, F Liu… - …, 2018 - academic.oup.com
Abstract Arachis monticola (2n= 4x= 40) is the only allotetraploid wild peanut within the
Arachis genus and section, with an AABB-type genome of∼ 2.7 Gb in size. The AA-type …

Chromosome-scale assembly of the bread wheat genome reveals thousands of additional gene copies

M Alonge, A Shumate, D Puiu, AV Zimin, SL Salzberg - Genetics, 2020 - academic.oup.com
Bread wheat (Triticum aestivum) is a major food crop and an important plant system for
agricultural genetics research. However, due to the complexity and size of its allohexaploid …

The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication

W Zhuang, H Chen, M Yang, J Wang, MK Pandey… - Nature …, 2019 - nature.com
High oil and protein content make tetraploid peanut a leading oil and food legume. Here we
report a high-quality peanut genome sequence, comprising 2.54 Gb with 20 …

Analysis of the bread wheat genome using whole-genome shotgun sequencing

R Brenchley, M Spannagl, M Pfeifer, GLA Barker… - Nature, 2012 - nature.com
Bread wheat (Triticum aestivum) is a globally important crop, accounting for 20 per cent of
the calories consumed by humans. Major efforts are underway worldwide to increase wheat …

SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species

RE Oliver, NA Tinker, GR Lazo, S Chao, EN Jellen… - PLoS …, 2013 - journals.plos.org
A physically anchored consensus map is foundational to modern genomics research;
however, construction of such a map in oat (Avena sativa L., 2 n= 6 x= 42) has been …