Selectivity of DNA Replication: The Importance of Base‐Pair Geometry over Hydrogen Bonding

U Diederichsen - Angewandte Chemie International Edition, 1998 - Wiley Online Library
The polymerase enzyme hardly differentiates between thymine and difluorotoluene
nucleotides with respect to the replication selectivity. X‐ray structure analysis show the …

Mimicking the structure and function of DNA: insights into DNA stability and replication

ET Kool, JC Morales… - Angewandte Chemie …, 2000 - Wiley Online Library
The physical and chemical factors that allow DNA to perform its functions in the cell have
been studied for several decades. Recent advances in the synthesis and manipulation of …

[引用][C] Remarkable sensitivity to DNA base shape in the DNA polymerase active site

HO Sintim, ET Kool - Angewandte Chemie, 2006 - Wiley Online Library
The mechanisms of DNA synthesis by DNA polymerase enzymes have come under
intensive study recently because of their close biological connections to cancer.[1] …

[引用][C] Orbital interactions in strong and weak hydrogen bonds are essential for DNA replication

C Fonseca Guerra… - Angewandte Chemie …, 2002 - Wiley Online Library
Based on a series of elegant experiments, Kool and coworkers [1] concluded that not
Watson±Crick hydrogen bonding but steric effects, that is, the shape of DNA bases is mainly …

Active site tightness and substrate fit in DNA replication

ET Kool - Annual review of biochemistry, 2002 - annualreviews.org
▪ Abstract Various physicochemical factors influence DNA replication fidelity. Since it is now
known that Watson-Crick hydrogen bonds are not necessary for efficient and selective …

Replication experiments with nucleotide base analogues

C Tamm, P Strazewski - Angewandte Chemie International …, 1990 - Wiley Online Library
The principles governing the replication fidelity of genomes are not fully understood yet.
Watson and Crick's base‐pairing principle for matched deoxyribonucleotide (DNA) bases …

Hydrogen bonding revisited: geometric selection as a principal determinant of DNA replication fidelity

MF Goodman - Proceedings of the National Academy of …, 1997 - National Acad Sciences
That hydrogen bonds play a central role in forming Watson–Crick (W–C) AT and GC base
pairs is a fundamental paradigm dating from the discovery of the structure of DNA in 1953. In …

[引用][C] Fidelity mechanisms in DNA replication

H Echols, MF Goodman - Annual review of biochemistry, 1991 - annualreviews.org
The survival of an organism requires precise duplication of the genome. Error frequencies
are typically only 10-9 to 10 10 per base replicated. The bio chemical problem posed by this …

Varied DNA polymerase: Substrate interactions in the nucleotide binding pocket

M Strerath, D Summerer, A Marx - 2002 - kops.uni-konstanz.de
Replication fidelity: How do DNA polymerases ensure selectivity? Further insights into
interactions between a DNA polymerase and the sugar moiety of the template nucleotide …

Efficient replication between non-hydrogen-bonded nucleoside shape analogs

JC Morales, ET Kool - nature structural biology, 1998 - nature.com
DNA polymerase enzymes make an error only once per 10 4–10 5 initial nucleotide
insertions during DNA replication. Most currently held models of this high fidelity cite the …