A strategy for sensitive, large scale quantitative metabolomics

X Liu, Z Ser, AA Cluntun, SJ Mentch… - Journal of visualized …, 2014 - pmc.ncbi.nlm.nih.gov
Metabolite profiling has been a valuable asset in the study of metabolism in health and
disease. However, current platforms have different limiting factors, such as labor intensive …

MetDAT: a modular and workflow-based free online pipeline for mass spectrometry data processing, analysis and interpretation

A Biswas, KC Mynampati, S Umashankar… - …, 2010 - academic.oup.com
Analysis of high throughput metabolomics experiments is a resource-intensive process that
includes pre-processing, pre-treatment and post-processing at each level of experimental …

Navigating freely-available software tools for metabolomics analysis

R Spicer, RM Salek, P Moreno, D Cañueto… - Metabolomics, 2017 - Springer
Introduction The field of metabolomics has expanded greatly over the past two decades,
both as an experimental science with applications in many areas, as well as in regards to …

Data processing for mass spectrometry-based metabolomics

M Katajamaa, M Orešič - Journal of chromatography A, 2007 - Elsevier
Modern analytical technologies afford comprehensive and quantitative investigation of a
multitude of different metabolites. Typical metabolomic experiments can therefore produce …

OmicsVis: an interactive tool for visually analyzing metabolomics data

P Livengood, R Maciejewski, W Chen, DS Ebert - BMC bioinformatics, 2012 - Springer
When analyzing metabolomics data, cancer care researchers are searching for differences
between known healthy samples and unhealthy samples. By analyzing and understanding …

MetaDB a data processing workflow in untargeted MS-based metabolomics experiments

P Franceschi, R Mylonas, N Shahaf… - … in bioengineering and …, 2014 - frontiersin.org
Due to their sensitivity and speed, mass-spectrometry based analytical technologies are
widely used to in metabolomics to characterize biological phenomena. To address issues …

A metabolomics workflow for analyzing complex biological samples using a combined method of untargeted and target-list based approaches

T Züllig, M Zandl-Lang, M Trötzmüller, J Hartler… - Metabolites, 2020 - mdpi.com
In the highly dynamic field of metabolomics, we have developed a method for the analysis of
hydrophilic metabolites in various biological samples. Therefore, we used hydrophilic …

[HTML][HTML] Viime: Visualization and integration of metabolomics experiments

R Choudhury, J Beezley, B Davis… - Journal of open …, 2020 - ncbi.nlm.nih.gov
Metabolomics involves the comprehensive measurement of metabolites from a biological
system. The resulting metabolite profiles are influenced by genetics, lifestyle, biological …

MetHoS: a platform for large-scale processing, storage and analysis of metabolomics data

K Tzanakis, TW Nattkemper, K Niehaus, SP Albaum - BMC bioinformatics, 2022 - Springer
Background Modern mass spectrometry has revolutionized the detection and analysis of
metabolites but likewise, let the data skyrocket with repositories for metabolomics data filling …

Bioinformatics tools for mass spectroscopy-based metabolomic data processing and analysis

M Sugimoto, M Kawakami, M Robert… - Current …, 2012 - ingentaconnect.com
Biological systems are increasingly being studied in a holistic manner, using omics
approaches, to provide quantitative and qualitative descriptions of the diverse collection of …