ReaxFF MD simulations of peptide-grafted gold nanoparticles

M Samieegohar, F Sha, AZ Clayborne, T Wei - Langmuir, 2019 - ACS Publications
Functionalized gold nanoparticles have critical applications in biodetection with surface-
enhanced Raman spectrum and drug delivery. In this study, reactive force field molecular …

Effect of peptide length on the conjugation to the gold nanoparticle surface: a molecular dynamic study

F Ramezani, M Habibi, H Rafii-Tabar… - DARU Journal of …, 2015 - Springer
Background Gold nanoparticles now command a great deal of attention for medical
applications. Despite the importance of nano-bio interfaces, interaction between peptides …

Comparison of amino acids interaction with gold nanoparticle

F Ramezani, M Amanlou, H Rafii-Tabar - Amino Acids, 2014 - Springer
The study of nanomaterial/biomolecule interface is an important emerging field in
bionanoscience, and additionally in many biological processes such as hard-tissue growth …

Influence of the alanine side-chain methyl group on the peptide-gold nanoparticles interactions

M Taha, MJ Lee - Journal of Molecular Liquids, 2020 - Elsevier
Gold nanoparticles (AuNPs) have attracted a great deal of attention in many fields of biology
and medicine, due to their potential applications in drug release, targeted drug delivery, and …

Effect of gold nanoparticle conjugation on peptide dynamics and structure

KH Lee, FM Ytreberg - Entropy, 2012 - mdpi.com
Molecular dynamics simulations were used to characterize the structure and dynamics for
several peptides and the effect of conjugating them to a gold nanoparticle. Peptide structure …

Synthesis and optical properties of highly stabilized peptide-coated gold nanoparticles

P Kalakonda, B Sreenivas - Plasmonics, 2017 - Springer
The interaction between peptide and gold nanoparticle surfaces has been increasingly of
interest for bionanotechnology applications. To fully understand how to control such …

Elucidating the influence of materials-binding peptide sequence on Au surface interactions and colloidal stability of Au nanoparticles

ZE Hughes, MA Nguyen, Y Li, MT Swihart, TR Walsh… - Nanoscale, 2017 - pubs.rsc.org
Peptide-mediated synthesis and assembly of nanostructures opens new routes to functional
inorganic/organic hybrid materials. However, understanding of the many factors that …

Effect of the ligand's bulkiness on the shape of functionalized gold nanoparticles in aqueous solutions: A molecular dynamics study

T Yamanaka, A De Nicola, G Munaò, TA Soares… - Chemical Physics …, 2019 - Elsevier
The functionalized gold nanoparticles (FGNPs) behaviour in biological environments is
completely altered by the presence of protein corona. Avoid its formation is required to …

Dynamics and self-assembly of bio-functionalized gold nanoparticles in solution: Reactive molecular dynamics simulations

S Monti, G Barcaro, L Sementa, V Carravetta, H Ågren - Nano Research, 2018 - Springer
The self-assembling properties, stability, and dynamics of hybrid nanocarriers (gold
nanoparticles (AuNPs) functionalized with cysteine-based peptides) in solution are studied …

Multilayer Model of Gold Nanoparticles (AuNPs) and Its Application in the Classical Molecular Dynamics Simulation of Citrate-Capped AuNPs

RS Janitra, W Destiarani, A Hardianto… - The Journal of …, 2023 - ACS Publications
Studies on the interaction between gold nanoparticles (AuNPs) and functional proteins have
been useful in developing diagnostic and therapeutic agents. Such studies require a …