Exploration of the structural requirements of HIV-protease inhibitors using pharmacophore, virtual screening and molecular docking approaches for lead identification

MA Islam, TS Pillay - Journal of Molecular Graphics and Modelling, 2015 - Elsevier
Pharmacoinformatics approaches are widely used in the field of drug discovery as it saves
time, investment and animal sacrifice. In the present study, pharmacore-based virtual …

Identification of novel HIV 1-protease inhibitors: application of ligand and structure based pharmacophore mapping and virtual screening

D Yadav, S Paliwal, R Yadav, M Pal, A Pandey - PloS one, 2012 - journals.plos.org
A combined ligand and structure-based drug design approach provides a synergistic
advantage over either methods performed individually. Present work bestows a good …

Multistage virtual screening and identification of novel HIV-1 protease inhibitors by integrating SVM, shape, pharmacophore and docking methods

Y Wei, J Li, Z Chen, F Wang, W Huang, Z Hong… - European journal of …, 2015 - Elsevier
The HIV-1 protease has proven to be a crucial component of the HIV replication machinery
and a reliable target for anti-HIV drug discovery. In this study, we applied an optimized …

Discovery of novel HIV protease inhibitors using modern computational techniques

SN Okafor, P Angsantikul, H Ahmed - International Journal of Molecular …, 2022 - mdpi.com
The human immunodeficiency virus type 1 (HIV-1) has continued to be a global concern.
With the new HIV incidence, the emergence of multi-drug resistance and the untoward side …

Investigation of novel indole-based HIV-1 protease inhibitors using virtual screening and text mining

K Sahin - Journal of Biomolecular Structure and Dynamics, 2021 - Taylor & Francis
Human immunodeficiency virus type 1 protease (HIV-1 PR) inhibitors have been used as
possible therapeutic agents for HIV-1 infection in clinical study. Most of the HIV therapy …

[PDF][PDF] A Random Forest Model for the Analysis of Chemical Descriptors for the Elucidation of HIV-1 Protease Protein-Ligand Interactions

GM Ko, S Reddy, S Kumar, BA Bailey… - … Science and Engineering …, 2010 - csrc.sdsu.edu
A model for the classification of 70 HIV-1 protease crystal structure binding pockets to one of
its complexed FDA approved protease inhibitors utilizing Random Forest has been …

[PDF][PDF] Molecular docking studies and comparative binding mode analysis of FDA approved HIV protease inhibitors

PK Deb, A Junaid, D El-Rabie, TY Hon… - Asian Journal of …, 2014 - researchgate.net
The HIV protease enzyme (maturation enzyme) is one of the most promising therapeutic
targets for the treatment of AIDS. Due to the mutation in the virus, there is always room for …

Molecular modeling studies of human immunodeficiency virus type 1 protease inhibitors using three‐dimensional quantitative structure‐activity relationship, virtual …

J Tong, P Zhan, M Bai, T Yao - Journal of Chemometrics, 2016 - Wiley Online Library
In this paper, two 3‐dimensional quantitative structure‐activity relationship models for 60
human immunodeficiency virus (HIV)‐1 protease inhibitors were established using random …

[HTML][HTML] Effect of biomolecular conformation on docking simulation: a case study on a potent HIV-1 protease inhibitor

N Razzaghi-Asl, S Sepehri, A Ebadi, R Miri… - Iranian journal of …, 2015 - ncbi.nlm.nih.gov
Human immunodeficiency virus infection/acquired immunodeficiency syndrome (HIV/AIDS)
is a disease pertained to the human immune system. Given its crucial role in viral replication …

HIVprotI: an integrated web based platform for prediction and design of HIV proteins inhibitors

A Qureshi, A Rajput, G Kaur, M Kumar - Journal of Cheminformatics, 2018 - Springer
A number of anti-retroviral drugs are being used for treating Human Immunodeficiency Virus
(HIV) infection. Due to emergence of drug resistant strains, there is a constant quest to …