Unraveling the histone's potential: a proteomics perspective

J Brumbaugh, D Phanstiel, JJ Coon - Epigenetics, 2008 - Taylor & Francis
Post translational modification (PTM) of histones has long been associated with epigenetic
regulation. Although genomic approaches have established correlation between a handful …

Comprehensive catalog of currently documented histone modifications

Y Zhao, BA Garcia - Cold Spring Harbor perspectives in …, 2015 - cshperspectives.cshlp.org
Modern techniques in molecular biology, genomics, and mass spectrometry–based
proteomics have identified a large number of novel histone posttranslational modifications …

[HTML][HTML] Suppl 1: Quantitative Proteomic Approaches to Studying Histone Modifications

BM Zee, NL Young, BA Garcia - Current chemical genomics, 2011 - ncbi.nlm.nih.gov
Histone post-translational modifications (PTMs) positively and negatively regulate gene
expression, and are consequently a vital influence on the genomic profile of all eukaryotic …

Proteomic characterization of novel histone post-translational modifications

AM Arnaudo, BA Garcia - Epigenetics & chromatin, 2013 - Springer
Histone post-translational modifications (PTMs) have been linked to a variety of biological
processes and disease states, thus making their characterization a critical field of study. In …

Identification and interrogation of combinatorial histone modifications

KR Karch, JE DeNizio, BE Black, BA Garcia - Frontiers in genetics, 2013 - frontiersin.org
Histone proteins are dynamically modified to mediate a variety of cellular processes
including gene transcription, DNA damage repair, and apoptosis. Regulation of these …

Expeditious extraction of histones from limited cells or tissue samples and quantitative top‐down proteomic analysis

MV Holt, T Wang, NL Young - Current protocols, 2021 - Wiley Online Library
Histones are the primary protein component of chromatin and are involved in virtually all
DNA‐templated processes. Histones are abundantly post‐translationally modified by a …

Breaking the histone code with quantitative mass spectrometry

LMP Britton, M Gonzales-Cope, BM Zee… - Expert review of …, 2011 - Taylor & Francis
Histone post-translational modifications (PTMs) comprise one of the most intricate nuclear
signaling networks that govern gene expression in a long-term and dynamic fashion. These …

[HTML][HTML] Biochemical systems approaches for the analysis of histone modification readout

M Soldi, M Bremang, T Bonaldi - Biochimica et Biophysica Acta (BBA) …, 2014 - Elsevier
Chromatin is the macromolecular nucleoprotein complex that governs the organization of
genetic material in the nucleus of eukaryotic cells. In chromatin, DNA is packed with histone …

Proteomic analysis of histone variants and their PTMs: strategies and pitfalls

S El Kennani, M Crespo, J Govin, D Pflieger - Proteomes, 2018 - mdpi.com
Epigenetic modifications contribute to the determination of cell fate and differentiation. The
molecular mechanisms underlying histone variants and post-translational modifications …

Recent achievements in characterizing the histone code and approaches to integrating epigenomics and systems biology

KA Janssen, S Sidoli, BA Garcia - Methods in enzymology, 2017 - Elsevier
Functional epigenetic regulation occurs by dynamic modification of chromatin, including
genetic material (ie, DNA methylation), histone proteins, and other nuclear proteins. Due to …