[PDF][PDF] The dynamic landscape of open chromatin during human cortical neurogenesis

L de la Torre-Ubieta, JL Stein, H Won, CK Opland… - Cell, 2018 - cell.com
Non-coding regions comprise most of the human genome and harbor a significant fraction of
risk alleles for neuropsychiatric diseases, yet their functions remain poorly defined. We …

Human evolved regulatory elements modulate genes involved in cortical expansion and neurodevelopmental disease susceptibility

H Won, J Huang, CK Opland, CL Hartl… - Nature …, 2019 - nature.com
Modern genetic studies indicate that human brain evolution is driven primarily by changes in
gene regulation, which requires understanding the biological function of largely non-coding …

Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler

F Noack, S Vangelisti, G Raffl, M Carido… - Nature …, 2022 - nature.com
How multiple epigenetic layers and transcription factors (TFs) interact to facilitate brain
development is largely unknown. Here, to systematically map the regulatory landscape of …

Cell-type-specific effects of genetic variation on chromatin accessibility during human neuronal differentiation

D Liang, AL Elwell, N Aygün, O Krupa, JM Wolter… - Nature …, 2021 - nature.com
Common genetic risk for neuropsychiatric disorders is enriched in regulatory elements
active during cortical neurogenesis. However, it remains poorly understood as to how these …

An atlas of chromatin accessibility in the adult human brain

JF Fullard, ME Hauberg, J Bendl, G Egervari… - Genome …, 2018 - genome.cshlp.org
Most common genetic risk variants associated with neuropsychiatric disease are noncoding
and are thought to exert their effects by disrupting the function of cis regulatory elements …

[PDF][PDF] A chromatin accessibility atlas of the developing human telencephalon

E Markenscoff-Papadimitriou, S Whalen, P Przytycki… - Cell, 2020 - cell.com
To discover regulatory elements driving the specificity of gene expression in different cell
types and regions of the developing human brain, we generated an atlas of open chromatin …

Developmental regulation of human cortex transcription and its clinical relevance at single base resolution

AE Jaffe, J Shin, L Collado-Torres, JT Leek, R Tao… - Nature …, 2015 - nature.com
Transcriptome analysis of human brain provides fundamental insight into development and
disease, but it largely relies on existing annotation. We sequenced transcriptomes of 72 …

Common schizophrenia risk variants are enriched in open chromatin regions of human glutamatergic neurons

ME Hauberg, J Creus-Muncunill, J Bendl… - Nature …, 2020 - nature.com
The chromatin landscape of human brain cells encompasses key information to
understanding brain function. Here we use ATAC-seq to profile the chromatin structure in …

Chromatin accessibility dynamics in a model of human forebrain development

AE Trevino, N Sinnott-Armstrong, J Andersen, SJ Yoon… - Science, 2020 - science.org
INTRODUCTION The cerebral cortex is responsible for higher-order functions in the nervous
system and has undergone substantial expansion in size in primates. The development of …

[PDF][PDF] Genomic perspectives of transcriptional regulation in forebrain development

AS Nord, K Pattabiraman, A Visel, JLR Rubenstein - Neuron, 2015 - cell.com
The forebrain is the seat of higher-order brain functions, and many human neuropsychiatric
disorders are due to genetic defects affecting forebrain development, making it imperative to …