A framework for identification of on-and off-target transcriptional responses to drug treatment

Y Huang, M Furuno, T Arakawa, S Takizawa… - Scientific reports, 2019 - nature.com
Owing to safety concerns or insufficient efficacy, few drug candidates are approved for
marketing. Drugs already on the market may be withdrawn due to adverse effects (AEs) …

Inferring statin-induced gene regulatory relationships in primary human hepatocytes

A Schröder, J Wollnik, C Wrzodek, A Dräger… - …, 2011 - academic.oup.com
Motivation: Statins are the most widely used cholesterol-lowering drugs. The primary target
of statins is HMG-CoA reductase, a key enzyme in cholesterol synthesis. However, statins …

[HTML][HTML] Drug repositioning and target finding based on clinical evidence

S Kaneko, T Nagashima - Biological and Pharmaceutical Bulletin, 2020 - jstage.jst.go.jp
Recent pharmacological studies have been developed based on finding new disease-
related genes, accompanied by the production of gene-manipulated disease model animals …

Pharmacogenomics of statins: understanding susceptibility to adverse effects

JP Kitzmiller, EB Mikulik, AM Dauki… - Pharmacogenomics …, 2016 - Taylor & Francis
Statins are a cornerstone of the pharmacologic treatment and prevention of atherosclerotic
cardiovascular disease. Atherosclerotic disease is a predominant cause of mortality and …

Predicting inhibitory and activatory drug targets by chemically and genetically perturbed transcriptome signatures

R Sawada, M Iwata, Y Tabei, H Yamato… - Scientific reports, 2018 - nature.com
Genome-wide identification of all target proteins of drug candidate compounds is a
challenging issue in drug discovery. Moreover, emerging phenotypic effects, including …

Mechanistic interpretation of non-coding variants for discovering transcriptional regulators of drug response

X Xie, C Hanson, S Sinha - BMC biology, 2019 - Springer
Background Identification of functional non-coding variants and their mechanistic
interpretation is a major challenge of modern genomics, especially for precision medicine …

Recycling side-effects into clinical markers for drug repositioning

M Duran-Frigola, P Aloy - Genome medicine, 2012 - Springer
Side-effects are the unintended consequence of therapeutic treatments, but they can also be
seen as valuable read-outs of drug effects in humans; these effects are difficult to infer or …

[HTML][HTML] When the same treatment has different response: The role of pharmacogenomics in statin therapy

E Zheng, P Madura, J Grandos, M Broncel… - Biomedicine & …, 2024 - Elsevier
Statins, also known as HMG-CoA reductase inhibitors, are one of the most potently
prescribed and thoroughly researched medications, predominantly utilized for managing …

Characterization of drug‐induced transcriptional modules: towards drug repositioning and functional understanding

M Iskar, G Zeller, P Blattmann, M Campillos… - Molecular systems …, 2013 - embopress.org
In pharmacology, it is crucial to understand the complex biological responses that drugs
elicit in the human organism and how well they can be inferred from model organisms. We …

Pharmacogenetics of statins: achievements, whole-genome analyses and future perspectives

I Postmus, JJW Verschuren, AJM De Craen… - …, 2012 - Taylor & Francis
Statins are the most commonly prescribed class of drug worldwide and therapy is highly
effective in reducing low-density lipoprotein cholesterol levels and cardiovascular events …