Recent advances in mammalian reproductive biology

L Wen, Q Liu, J Xu, X Liu, C Shi, Z Yang… - Science China Life …, 2020 - Springer
Reproductive biology is a uniquely important topic since it is about germ cells, which are
central for transmitting genetic information from generation to generation. In this review, we …

Essential roles of HDAC1 and 2 in lineage development and genome-wide DNA methylation during mouse preimplantation development

P Zhao, H Wang, H Wang, Y Dang, L Luo, S Li, Y Shi… - Epigenetics, 2020 - Taylor & Francis
Epigenetic modifications, including DNA methylation and histone modifications, are
reprogrammed considerably following fertilization during mammalian early embryonic …

[HTML][HTML] Proteomics analysis reveals that Warburg effect along with modification in lipid metabolism improves in vitro embryo development under low oxygen

Q Shahzad, L Pu, A Ahmed Wadood, M Waqas… - International Journal of …, 2020 - mdpi.com
The molecular mechanism regulating embryo development under reduced oxygen tension
remains elusive. This study aimed to identify the molecular mechanism impacting embryo …

[HTML][HTML] Comparative analysis of single-cell transcriptomics in human and Zebrafish oocytes

H Can, SK Chanumolu, E Gonzalez-Muñoz… - BMC genomics, 2020 - Springer
Background Zebrafish is a popular model organism, which is widely used in developmental
biology research. Despite its general use, the direct comparison of the zebrafish and human …

[HTML][HTML] Alternative splicing signatures in preimplantation embryo development

GG Tian, J Li, J Wu - Cell & Bioscience, 2020 - Springer
Background Preimplantation embryo development is a highly ordered sequence of
processes and it requires a precise temporal and spatial control of gene expression …

Amhr2-Cre–Mediated Global Tspo Knockout

J Fan, E Campioli, C Sottas, B Zirkin… - Journal of the …, 2020 - academic.oup.com
Although the role of translocator protein (TSPO) in cholesterol transport in steroid-
synthesizing cells has been studied extensively, recent studies of TSPO genetic depletion …

scDoc: correcting drop-out events in single-cell RNA-seq data

D Ran, S Zhang, N Lytal, L An - Bioinformatics, 2020 - academic.oup.com
Motivation Single-cell RNA-sequencing (scRNA-seq) has become an important tool to
unravel cellular heterogeneity, discover new cell (sub) types, and understand cell …

[HTML][HTML] Unsupervised inference of developmental directions for single cells using VECTOR

F Zhang, X Li, W Tian - Cell Reports, 2020 - cell.com
A key step in trajectory inference is the determination of starting cells, which is typically done
by using manually selected marker genes. In this study, we find that the quantile polarization …

Progesterone-induced RNA Hand2os1 regulates decidualization in mice uteri

Y Jia, R Cai, T Yu, R Zhang, S Liu, XY Guo… - …, 2020 - rep.bioscientifica.com
Decidualization is a critical process for successful embryo implantation and subsequent
placenta formation. The characterization and physiological function of long non-coding RNA …

Single-cell sequencing in the field of stem cells

T Chen, J Li, Y Jia, J Wang, R Sang, Y Zhang… - Current …, 2020 - ingentaconnect.com
Variation and heterogeneity between cells are the basic characteristics of stem cells.
Traditional sequencing analysis methods often cover up this difference. Single-cell …