Feature selection strategies for drug sensitivity prediction

K Koras, D Juraeva, J Kreis, J Mazur, E Staub… - Scientific reports, 2020 - nature.com
Drug sensitivity prediction constitutes one of the main challenges in personalized medicine.
Critically, the sensitivity of cancer cells to treatment depends on an unknown subset of a …

Anticancer drug sensitivity prediction in cell lines from baseline gene expression through recursive feature selection

Z Dong, N Zhang, C Li, H Wang, Y Fang, J Wang… - BMC cancer, 2015 - Springer
Background An enduring challenge in personalized medicine is to select right drug for
individual patients. Testing drugs on patients in large clinical trials is one way to assess their …

Feature selection translates drug response predictors from cell lines to patients

S Yuan, YC Chen, CH Tsai, HW Chen… - Frontiers in …, 2023 - frontiersin.org
Targeted therapies and chemotherapies are prevalent in cancer treatment. Identification of
predictive markers to stratify cancer patients who will respond to these therapies remains …

Predicting tumor response to drugs based on gene-expression biomarkers of sensitivity learned from cancer cell lines

Y Li, DM Umbach, JM Krahn, I Shats, X Li, L Li - BMC genomics, 2021 - Springer
Background Human cancer cell line profiling and drug sensitivity studies provide valuable
information about the therapeutic potential of drugs and their possible mechanisms of action …

[HTML][HTML] Machine learning in the prediction of cancer therapy

R Rafique, SMR Islam, JU Kazi - Computational and Structural …, 2021 - Elsevier
Resistance to therapy remains a major cause of cancer treatment failures, resulting in many
cancer-related deaths. Resistance can occur at any time during the treatment, even at the …

Network-based drug sensitivity prediction

KT Ahmed, S Park, Q Jiang, Y Yeu, TH Hwang… - BMC medical …, 2020 - Springer
Background Drug sensitivity prediction and drug responsive biomarker selection on high-
throughput genomic data is a critical step in drug discovery. Many computational methods …

Ensembled machine learning framework for drug sensitivity prediction

A Sharma, R Rani - IET Systems Biology, 2020 - Wiley Online Library
Drug sensitivity prediction is one of the critical tasks involved in drug designing and
discovery. Recently several online databases and consortiums have contributed to providing …

Algorithms for drug sensitivity prediction

C De Niz, R Rahman, X Zhao, R Pal - Algorithms, 2016 - mdpi.com
Precision medicine entails the design of therapies that are matched for each individual
patient. Thus, predictive modeling of drug responses for specific patients constitutes a …

Systematic identification of feature combinations for predicting drug response with Bayesian multi-view multi-task linear regression

M Ammad-Ud-Din, SA Khan, K Wennerberg… - …, 2017 - academic.oup.com
Motivation A prime challenge in precision cancer medicine is to identify genomic and
molecular features that are predictive of drug treatment responses in cancer cells. Although …

Optimization of drug–target affinity prediction methods through feature processing schemes

X Ru, Q Zou, C Lin - Bioinformatics, 2023 - academic.oup.com
Motivation Numerous high-accuracy drug–target affinity (DTA) prediction models, whose
performance is heavily reliant on the drug and target feature information, are developed at …