A review of atlas-based segmentation for magnetic resonance brain images

M Cabezas, A Oliver, X Lladó, J Freixenet… - Computer methods and …, 2011 - Elsevier
Normal and abnormal brains can be segmented by registering the target image with an
atlas. Here, an atlas is defined as the combination of an intensity image (template) and its …

Comparative evaluation of registration algorithms in different brain databases with varying difficulty: results and insights

Y Ou, H Akbari, M Bilello, X Da… - IEEE transactions on …, 2014 - ieeexplore.ieee.org
Evaluating various algorithms for the inter-subject registration of brain magnetic resonance
images (MRI) is a necessary topic receiving growing attention. Existing studies evaluated …

Iconic feature based nonrigid registration: the PASHA algorithm

P Cachier, E Bardinet, D Dormont, X Pennec… - Computer vision and …, 2003 - Elsevier
In this paper, we first propose a new subdivision of the image information axis used for the
classification of nonrigid registration algorithms. Namely, we introduce the notion of iconic …

Atlas-based segmentation of pathological MR brain images using a model of lesion growth

MB Cuadra, C Pollo, A Bardera… - IEEE transactions on …, 2004 - ieeexplore.ieee.org
We propose a method for brain atlas deformation in the presence of large space-occupying
tumors, based on an a priori model of lesion growth that assumes radial expansion of the …

A unified approach to fast image registration and a new curvature based registration technique

B Fischer, J Modersitzki - Linear Algebra and its applications, 2004 - Elsevier
Image registration is central to many challenges in medical imaging today. It has a vast
range of applications. The purpose of this note is twofold. First, we review some of the most …

Deformable registration of glioma images using EM algorithm and diffusion reaction modeling

A Gooya, G Biros, C Davatzikos - IEEE transactions on medical …, 2010 - ieeexplore.ieee.org
This paper investigates the problem of atlas registration of brain images with gliomas.
Multiparametric imaging modalities (T1, T1-CE, T2, and FLAIR) are first utilized for …

ORBIT: A multiresolution framework for deformable registration of brain tumor images

EI Zacharaki, D Shen, SK Lee… - IEEE transactions on …, 2008 - ieeexplore.ieee.org
A deformable registration method is proposed for registering a normal brain atlas with
images of brain tumor patients. The registration is facilitated by first simulating the tumor …

Learning-based deformable registration of MR brain images

G Wu, F Qi, D Shen - IEEE transactions on medical imaging, 2006 - ieeexplore.ieee.org
This paper presents a learning-based method for deformable registration of magnetic
resonance (MR) brain images. There are two novelties in the proposed registration method …

Non-diffeomorphic registration of brain tumor images by simulating tissue loss and tumor growth

EI Zacharaki, CS Hogea, D Shen, G Biros… - Neuroimage, 2009 - Elsevier
Although a variety of diffeomorphic deformable registration methods exist in the literature,
application of these methods in the presence of space-occupying lesions is not …

Predicting survival of glioblastoma from automatic whole-brain and tumor segmentation of MR images

S Pálsson, S Cerri, HS Poulsen, T Urup, I Law… - Scientific Reports, 2022 - nature.com
Survival prediction models can potentially be used to guide treatment of glioblastoma
patients. However, currently available MR imaging biomarkers holding prognostic …