[HTML][HTML] Quantitative mapping of the brain's structural connectivity using diffusion MRI tractography: A review

F Zhang, A Daducci, Y He, S Schiavi, C Seguin… - Neuroimage, 2022 - Elsevier
Diffusion magnetic resonance imaging (dMRI) tractography is an advanced imaging
technique that enables in vivo reconstruction of the brain's white matter connections at …

A review of predictive and contrastive self-supervised learning for medical images

WC Wang, E Ahn, D Feng, J Kim - Machine Intelligence Research, 2023 - Springer
Over the last decade, supervised deep learning on manually annotated big data has been
progressing significantly on computer vision tasks. But, the application of deep learning in …

Volumetric white matter tract segmentation with nested self-supervised learning using sequential pretext tasks

Q Lu, Y Li, C Ye - Medical Image Analysis, 2021 - Elsevier
White matter (WM) tract segmentation based on diffusion magnetic resonance imaging
(dMRI) provides an important tool for the analysis of brain development, function, and …

[HTML][HTML] Deep fiber clustering: anatomically informed fiber clustering with self-supervised deep learning for fast and effective tractography parcellation

Y Chen, C Zhang, T Xue, Y Song, N Makris, Y Rathi… - NeuroImage, 2023 - Elsevier
White matter fiber clustering is an important strategy for white matter parcellation, which
enables quantitative analysis of brain connections in health and disease. In combination …

A survey of the impact of self-supervised pretraining for diagnostic tasks in medical X-ray, CT, MRI, and ultrasound

B VanBerlo, J Hoey, A Wong - BMC Medical Imaging, 2024 - Springer
Self-supervised pretraining has been observed to be effective at improving feature
representations for transfer learning, leveraging large amounts of unlabelled data. This …

A systematic review of automated methods to perform white matter tract segmentation

A Joshi, H Li, NA Parikh, L He - Frontiers in Neuroscience, 2024 - frontiersin.org
White matter tract segmentation is a pivotal research area that leverages diffusion-weighted
magnetic resonance imaging (dMRI) for the identification and mapping of individual white …

Deep diffusion MRI registration (DDMReg): a deep learning method for diffusion MRI registration

F Zhang, WM Wells, LJ O'Donnell - IEEE transactions on …, 2021 - ieeexplore.ieee.org
In this paper, we present a deep learning method, DDMReg, for accurate registration
between diffusion MRI (dMRI) datasets. In dMRI registration, the goal is to spatially align …

A survey of the impact of self-supervised pretraining for diagnostic tasks with radiological images

B VanBerlo, J Hoey, A Wong - arXiv preprint arXiv:2309.02555, 2023 - arxiv.org
Self-supervised pretraining has been observed to be effective at improving feature
representations for transfer learning, leveraging large amounts of unlabelled data. This …

Knowledge transfer for few-shot segmentation of novel white matter tracts

Q Lu, C Ye - Information Processing in Medical Imaging: 27th …, 2021 - Springer
Convolutional neural networks (CNNs) have achieved state-of-the-art performance for white
matter (WM) tract segmentation based on diffusion magnetic resonance imaging (dMRI) …

DFC: anatomically informed Fiber clustering with self-supervised deep learning for fast and effective Tractography Parcellation

Y Chen, C Zhang, T Xue, Y Song, N Makris… - arXiv preprint arXiv …, 2022 - arxiv.org
White matter fiber clustering (WMFC) is an important strategy for white matter parcellation,
which enables quantitative analysis of white matter connections in health and disease …