AC Nica, L Parts, D Glass, J Nisbet, A Barrett… - PLoS …, 2011 - journals.plos.org
While there have been studies exploring regulatory variation in one or more tissues, the complexity of tissue-specificity in multiple primary tissues is not yet well understood. We …
Weighted gene coexpression network analysis (WGCNA) has been applied to many important studies since its introduction in 2005. WGCNA can be used as a data exploratory …
G Zhang, P He, H Tan, A Budhu, J Gaedcke… - Clinical cancer …, 2013 - AACR
Purpose: To identify metabolic pathways that are perturbed in pancreatic ductal adenocarcinoma (PDAC), we investigated gene-metabolite networks with integration of …
A key goal of biology is to construct networks that predict complex system behavior. We combine multiple types of molecular data, including genotypic, expression, transcription …
PL Molyneaux, SAG Willis-Owen, MJ Cox… - American journal of …, 2017 - atsjournals.org
Rationale: Changes in the respiratory microbiome are associated with disease progression in idiopathic pulmonary fibrosis (IPF). The role of the host response to the respiratory …
AE Dixon, F Holguin, A Sood, CM Salome… - Proceedings of the …, 2010 - atsjournals.org
Rationale: The developed world is currently facing an epidemic of obesity. With the increased prevalence of obesity has come the recognition that obesity is a risk factor for …
Vaccination is one of the greatest triumphs of modern medicine, yet we remain largely ignorant of the mechanisms by which successful vaccines stimulate protective immunity …
The biomarker glycoprotein acetylation (GlycA) has been shown to predict risk of cardiovascular disease and all-cause mortality. Here, we characterize biological processes …
J Li, D Zhou, W Qiu, Y Shi, JJ Yang, S Chen, Q Wang… - Scientific reports, 2018 - nature.com
Investigating how genes jointly affect complex human diseases is important, yet challenging. The network approach (eg, weighted gene co-expression network analysis (WGCNA)) is a …