Small RNAs in bacteria and archaea: who they are, what they do, and how they do it

EGH Wagner, P Romby - Advances in genetics, 2015 - Elsevier
Small RNAs are ubiquitously present regulators in all kingdoms of life. Most bacterial and
archaeal small RNAs (sRNAs) act by antisense mechanisms on multiple target mRNAs …

The making of a heterocyst in cyanobacteria

X Zeng, CC Zhang - Annual Review of Microbiology, 2022 - annualreviews.org
Heterocyst differentiation that occurs in some filamentous cyanobacteria, such as Anabaena
sp. PCC 7120, provides a unique model for prokaryotic developmental biology. Heterocyst …

Aquatic and terrestrial cyanobacteria produce methane

M Bižić, T Klintzsch, D Ionescu, MY Hindiyeh… - Science …, 2020 - science.org
Evidence is accumulating to challenge the paradigm that biogenic methanogenesis,
considered a strictly anaerobic process, is exclusive to archaea. We demonstrate that …

Comparative Analysis of the Primary Transcriptome of Synechocystis sp. PCC 6803

M Kopf, S Klähn, I Scholz, JKF Matthiessen… - DNA …, 2014 - academic.oup.com
RNA-seq and especially differential RNA-seq-type transcriptomic analyses (dRNA-seq) are
powerful analytical tools, as they not only provide insights into gene expression changes but …

An overview of diversity, occurrence, genetics and toxin production of bloom-forming Dolichospermum (Anabaena) species

X Li, TW Dreher, R Li - Harmful algae, 2016 - Elsevier
The new genus name Dolichospermum, for most of the planktonic former members of the
genus Anabaena, is one of the most ubiquitous bloom-forming cyanobacterial genera. Its …

Regulation of CO2 Concentrating Mechanism in Cyanobacteria

RL Burnap, M Hagemann, A Kaplan - Life, 2015 - mdpi.com
In this chapter, we mainly focus on the acclimation of cyanobacteria to the changing ambient
CO2 and discuss mechanisms of inorganic carbon (Ci) uptake, photorespiration, and the …

Differential RNA-seq: the approach behind and the biological insight gained

CM Sharma, J Vogel - Current opinion in microbiology, 2014 - Elsevier
Highlights•RNA-seq has become the method of choice for bacterial transcriptomics.•
Differential RNA-seq (dRNA-seq) distinguishes primary and processed transcripts.•dRNA …

Attachment of phycobilisomes in an antenna–photosystem I supercomplex of cyanobacteria

M Watanabe, DA Semchonok… - Proceedings of the …, 2014 - National Acad Sciences
Oxygenic photosynthesis is driven by photosystems I and II (PSI and PSII, respectively). Both
have specific antenna complexes and the phycobilisome (PBS) is the major antenna protein …

Cyanobacterial oxygenic photosynthesis is protected by flavodiiron proteins

Y Allahverdiyeva, J Isojärvi, P Zhang, EM Aro - Life, 2015 - mdpi.com
Flavodiiron proteins (FDPs, also called flavoproteins, Flvs) are modular enzymes widely
present in Bacteria and Archaea. The evolution of cyanobacteria and oxygenic …

Global mapping of transcription start sites and promoter motifs in the symbiotic α-proteobacterium Sinorhizobium meliloti1021

JP Schlüter, J Reinkensmeier, MJ Barnett, C Lang… - BMC genomics, 2013 - Springer
Background Sinorhizobium meliloti is a soil-dwelling α-proteobacterium that possesses a
large, tripartite genome and engages in a nitrogen fixing symbiosis with its plant hosts …