Yin and yang of interferons: lessons from the coronavirus disease 2019 (COVID-19) pandemic

SS Akusjärvi, I Zanoni - Current Opinion in Immunology, 2024 - Elsevier
The host immune response against severe acute respiratory syndrome coronavirus 2
includes the induction of a group of natural antiviral cytokines called interferons (IFNs) …

[HTML][HTML] Participation of Single-Nucleotide Variants in IFNAR1 and IFNAR2 in the Immune Response against SARS-CoV-2 Infection: A Systematic Review

MF López-Bielma, R Falfán-Valencia, E Abarca-Rojano… - Pathogens, 2023 - mdpi.com
Host genetic factors significantly influence susceptibility to SARS-CoV-2 infection and
COVID-19 severity. Among these genetic factors are single-nucleotide variants (SNVs) …

Deciphering the host genetic factors conferring susceptibility to severe COVID-19 using exome sequencing

K Uslu, F Ozcelik, G Zararsiz, V Eldem, A Cephe… - Genes & …, 2024 - nature.com
The COVID-19 pandemic remains a significant public health concern despite the new
vaccines and therapeutics. The clinical course of acute SARS-CoV-2 infection is highly …

Deciphering the antigen specificities of antibodies by clustering their complementarity determining region sequences

DS Saputri, HS Ismanto, DK Nugraha, Z Xu… - Msystems, 2023 - Am Soc Microbiol
Recent advances in adaptive immune receptor repertoire sequencing have provided
abundant B cell receptor (BCR) sequences under various conditions, including vaccination …

Gastrointestinal symptoms in COVID-19 and disease severity: a Japanese registry-based retrospective cohort study

Y Matsubara, H Kiyohara, Y Mikami, K Nanki… - Journal of …, 2024 - Springer
Background Research on whether gastrointestinal symptoms correlate with the severity of
Coronavirus Disease 2019 (COVID-19) has been inconclusive. This study aimed to clarify …

Genetic examination of hematological parameters in SARS-CoV-2 infection and COVID-19

Q Sun, B Rowland, W Wang, TW Miller-Fleming… - Blood Cells, Molecules …, 2023 - Elsevier
People hospitalized with COVID-19 often exhibit altered hematological traits associated with
disease prognosis (eg, lower lymphocyte and platelet counts). We investigated whether inter …

[PDF][PDF] Systems-wide view of host-pathogen interactions across COVID-19 severities using integrated omics analysis

MS Singh, A Pyati, RD Rubi, R Subramanian, VY Muley… - Iscience, 2024 - cell.com
The mechanisms explaining the variability in COVID-19 clinical manifestations (mild,
moderate, and severe) are not fully understood. To identify key gene expression markers …

[HTML][HTML] Resolution of SARS-CoV-2 infection in human lung tissues is driven by extravascular CD163+ monocytes

D Kenney, AK O'Connell, AE Tseng, J Turcinovic… - bioRxiv, 2024 - ncbi.nlm.nih.gov
The lung-resident immune mechanisms driving resolution of SARS-CoV-2 infection in
humans remain elusive. Using mice co-engrafted with a genetically matched human …

Adaptive best subset selection algorithm and genetic algorithm aided ensemble learning method identified a robust severity score of COVID‐19 patients

W Kong, J Zhu, S Bi, L Huang, P Wu, SJ Zhu - iMeta, 2023 - Wiley Online Library
Currently, since there are still some inconsistencies in the severity data types of COVID‐19
among different hospitals or sources [8], we aimed to establish a consistent severity score for …

Extracting immunological and clinical heterogeneity across autoimmune rheumatic diseases by cohort-wide immunophenotyping

H Tanaka, Y Okada, S Nakayamada… - Annals of the …, 2024 - ard.bmj.com
Objective Extracting immunological and clinical heterogeneity across autoimmune
rheumatic diseases (AIRDs) is essential towards personalised medicine. Methods We …