The evaluation of tools used to predict the impact of missense variants is hindered by two types of circularity

DG Grimm, CA Azencott, F Aicheler, U Gieraths… - Human …, 2015 - Wiley Online Library
Prioritizing missense variants for further experimental investigation is a key challenge in
current sequencing studies for exploring complex and Mendelian diseases. A large number …

Comprehensive characterization of amino acid positions in protein structures reveals molecular effect of missense variants

S Iqbal, E Pérez-Palma, JB Jespersen… - Proceedings of the …, 2020 - National Acad Sciences
Interpretation of the colossal number of genetic variants identified from sequencing
applications is one of the major bottlenecks in clinical genetics, with the inference of the …

The developmental biology of genetic Notch disorders

J Mašek, ER Andersson - Development, 2017 - journals.biologists.com
Notch signaling regulates a vast array of crucial developmental processes. It is therefore not
surprising that mutations in genes encoding Notch receptors or ligands lead to a variety of …

Pathogenic variant burden in the ExAC database: an empirical approach to evaluating population data for clinical variant interpretation

Y Kobayashi, S Yang, K Nykamp, J Garcia, SE Lincoln… - Genome medicine, 2017 - Springer
Background The frequency of a variant in the general population is a key criterion used in
the clinical interpretation of sequence variants. With certain exceptions, such as founder …

Update review of the acute porphyrias

PE Stein, MN Badminton… - British journal of …, 2017 - Wiley Online Library
Acute porphyrias are rare inherited disorders due to deficiencies of haem synthesis
enzymes. To date, all UK cases have been one of the three autosomal dominant forms …

Effective diagnosis of genetic disease by computational phenotype analysis of the disease-associated genome

T Zemojtel, S Köhler, L Mackenroth, M Jäger… - Science translational …, 2014 - science.org
Less than half of patients with suspected genetic disease receive a molecular diagnosis. We
have therefore integrated next-generation sequencing (NGS), bioinformatics, and clinical …

The genetics of hereditary angioedema: a review

R Santacroce, G D'Andrea, AB Maffione… - Journal of clinical …, 2021 - mdpi.com
Hereditary angioedema is a rare inherited disorder characterized by recurrent episodes of
the accumulation of fluids outside of the blood vessels, causing rapid swelling of tissues in …

Germline genetic variation in ETV6 and risk of childhood acute lymphoblastic leukaemia: a systematic genetic study

T Moriyama, ML Metzger, G Wu, R Nishii… - The Lancet …, 2015 - thelancet.com
Background Hereditary predisposition is rarely suspected for childhood acute lymphoblastic
leukaemia (ALL). Recent reports of germline ETV6 variations associated with substantial …

Opportunities and challenges of whole-genome and-exome sequencing

BS Petersen, B Fredrich, MP Hoeppner, D Ellinghaus… - BMC genetics, 2017 - Springer
Recent advances in the development of sequencing technologies provide researchers with
unprecedented possibilities for genetic analyses. In this review, we will discuss the history of …

Comparison of exome and genome sequencing technologies for the complete capture of protein‐coding regions

SH Lelieveld, M Spielmann, S Mundlos… - Human …, 2015 - Wiley Online Library
For next‐generation sequencing technologies, sufficient base‐pair coverage is the foremost
requirement for the reliable detection of genomic variants. We investigated whether whole …