[HTML][HTML] PTM-ssMP: a web server for predicting different types of post-translational modification sites using novel site-specific modification profile

Y Liu, M Wang, J Xi, F Luo, A Li - International journal of biological …, 2018 - ncbi.nlm.nih.gov
Protein post-translational modifications (PTMs) are chemical modifications of a protein after
its translation. Owing to its play an important role in deep understanding of various biological …

SUMO regulates the assembly and function of a cytoplasmic intermediate filament protein in C. elegans

R Kaminsky, C Denison, U Bening-Abu-Shach… - Developmental cell, 2009 - cell.com
Sumoylation is a reversible posttranslational modification that plays roles in many
processes, including transcriptional regulation, cell division, chromosome integrity, and DNA …

SUMOgo: Prediction of sumoylation sites on lysines by motif screening models and the effects of various post-translational modifications

CC Chang, CH Tung, CW Chen, CH Tu, YW Chu - Scientific reports, 2018 - nature.com
Most modern tools used to predict sites of small ubiquitin-like modifier (SUMO) binding
(referred to as SUMOylation) use algorithms, chemical features of the protein, and …

GlyStruct: glycation prediction using structural properties of amino acid residues

HM Reddy, A Sharma, A Dehzangi, D Shigemizu… - BMC …, 2019 - Springer
Background Glycation is a one of the post-translational modifications (PTM) where sugar
molecules and residues in protein sequences are covalently bonded. It has become one of …

Reconstitution of Arabidopsis thaliana SUMO Pathways in E. coli: Functional Evaluation of SUMO Machinery Proteins and Mapping of SUMOylation Sites by Mass …

S Okada, M Nagabuchi, Y Takamura… - Plant and cell …, 2009 - academic.oup.com
Recent studies have revealed various functions for the small ubiquitin-related modifier
(SUMO) in diverse biological phenomena, such as regulation of cell division, DNA repair …

SUMOylation of DNA topoisomerase IIα regulates histone H3 kinase Haspin and H3 phosphorylation in mitosis

MM Yoshida, L Ting, SP Gygi, Y Azuma - Journal of Cell Biology, 2016 - rupress.org
DNA topoisomerase II (TOP2) plays a pivotal role in faithful chromosome separation through
its strand-passaging activity that resolves tangled genomic DNA during mitosis. Additionally …

SUMOhydro: a novel method for the prediction of sumoylation sites based on hydrophobic properties

YZ Chen, Z Chen, YA Gong, G Ying - PloS one, 2012 - journals.plos.org
Sumoylation is one of the most essential mechanisms of reversible protein post-translational
modifications and is a crucial biochemical process in the regulation of a variety of important …

RNA metabolism in ALS: when normal processes become pathological

CA Droppelmann, D Campos-Melo… - … Lateral Sclerosis and …, 2014 - Taylor & Francis
Amyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disease caused by the
death of motor neurons. While the exact molecular and cellular basis for motor neuron death …

SUMOylation of Syntaxin1A regulates presynaptic endocytosis

TJ Craig, D Anderson, AJ Evans, F Girach… - Scientific reports, 2015 - nature.com
Neurotransmitter release from the presynaptic terminal is under very precise spatial and
temporal control. Following neurotransmitter release, synaptic vesicles are recycled by …

SUMOylation of FOXP1 regulates transcriptional repression via CtBP1 to drive dendritic morphogenesis

DL Rocca, KA Wilkinson, JM Henley - Scientific reports, 2017 - nature.com
Abstract Forkhead Box P (FOXP) transcriptional repressors play a major role in brain
development and their dysfunction leads to human cognitive disorders. However, little is …