Modificomics: posttranslational modifications beyond protein phosphorylation and glycosylation

J Reinders, A Sickmann - Biomolecular engineering, 2007 - Elsevier
Posttranslational modifications of proteins possess key functions in the regulation of various
cellular processes. While they facilitate fast, location-specific and transient reactions to …

A novel method for high accuracy sumoylation site prediction from protein sequences

J Xu, Y He, B Qiang, J Yuan, X Peng, XM Pan - BMC bioinformatics, 2008 - Springer
Background Protein sumoylation is an essential dynamic, reversible post translational
modification that plays a role in dozens of cellular activities, especially the regulation of gene …

PIASy-dependent SUMOylation regulates DNA topoisomerase IIα activity

H Ryu, M Furuta, D Kirkpatrick, SP Gygi… - Journal of Cell …, 2010 - rupress.org
DNA topoisomerase IIα (TopoIIα) is an essential chromosome-associated enzyme with
activity implicated in the resolution of tangled DNA at centromeres before anaphase onset …

PHS1 regulates meiotic recombination and homologous chromosome pairing by controlling the transport of RAD50 to the nucleus

A Ronceret, MP Doutriaux… - Proceedings of the …, 2009 - National Acad Sciences
Recombination and pairing of homologous chromosomes are critical for bivalent formation
in meiotic prophase. In many organisms, including yeast, mammals, and plants, pairing and …

Proteomic strategies for characterizing ubiquitin-like modifications

C Li, TG Nelson, ACO Vertegaal… - Nature Reviews Methods …, 2021 - nature.com
The modification of proteins by the addition of ubiquitin and other ubiquitin-like proteins
(UBLs) is involved in a wide range of cellular processes including cell cycle progression, the …

The impact of the C-terminal region on the interaction of topoisomerase II alpha with mitotic chromatin

M Antoniou-Kourounioti, ML Mimmack… - International journal of …, 2019 - mdpi.com
Type II topoisomerase enzymes are essential for resolving DNA topology problems arising
through various aspects of DNA metabolism. In vertebrates two isoforms are present, one of …

Proteomic databases and tools to decipher post-translational modifications

KS Kamath, MS Vasavada, S Srivastava - Journal of proteomics, 2011 - Elsevier
Post-translational modifications (PTMs) are vital cellular control mechanism, which affect
protein properties, including folding, conformation, activity and consequently, their functions …

SUMO modification stabilizes dengue virus nonstructural protein 5 to support virus replication

CI Su, CH Tseng, CY Yu, MMC Lai - Journal of virology, 2016 - Am Soc Microbiol
Small ubiquitin-like modifier (SUMO) participates in a reversible posttranslational
modification process (SUMOylation) that regulates a wide variety of cellular processes and …

SUMOylation enhances DNA methyltransferase 1 activity

B Lee, MT Muller - Biochemical Journal, 2009 - portlandpress.com
DNA methylation regulates gene expression through a complex network of protein–protein
and protein–DNA interactions in chromatin. The maintenance methylase, DNMT1 (DNA …

SUMOylation negatively regulates angiogenesis by targeting endothelial NOTCH signaling

X Zhu, S Ding, C Qiu, Y Shi, L Song, Y Wang… - Circulation …, 2017 - Am Heart Assoc
Rationale: The highly conserved NOTCH (neurogenic locus notch homolog protein)
signaling pathway functions as a key cell–cell interaction mechanism controlling cell fate …