Integrative computational modeling of the lymph node stromal cell landscape

M Novkovic, L Onder, HW Cheng, G Bocharov… - Frontiers in …, 2018 - frontiersin.org
Adaptive immune responses develop in secondary lymphoid organs such as lymph nodes
(LNs) in a well-coordinated series of interactions between migrating immune cells and …

Systems biology approaches for understanding cellular mechanisms of immunity in lymph nodes during infection

HP Mirsky, MJ Miller, JJ Linderman… - Journal of theoretical …, 2011 - Elsevier
Adaptive immunity is initiated in secondary lymphoid tissues when naive T cells recognize
foreign antigen presented as MHC-bound peptide on the surface of dendritic cells. Only a …

[HTML][HTML] Anatomy, lymph nodes

I Bujoreanu, V Gupta - 2020 - europepmc.org
The lymphatic system is composed of lymphatic vessels and lymphoid organs such as the
thymus, tonsils, lymph nodes, and spleen. These assist in acquired and innate immunity, in …

[图书][B] Immune system modelling and simulation

F Castiglione, F Celada - 2015 - books.google.com
This book describes a computational model of the immune system reaction, C-ImmSim. The
book presents the basic model as well as the various customizations to implement the …

Hybrid approach to model the spatial regulation of T cell responses

A Bouchnita, G Bocharov, A Meyerhans, V Volpert - BMC immunology, 2017 - Springer
Background Moving from the molecular and cellular level to a multi-scale systems
understanding of immune responses requires the development of novel approaches to …

Mechanistic modeling and multiscale applications for precision medicine: theory and practice

E Stalidzans, M Zanin, P Tieri, F Castiglione… - Network and systems …, 2020 - liebertpub.com
Drug research, therapy development, and other areas of pharmacology and medicine can
benefit from simulations and optimization of mathematical models that contain a …

Potential predictors of type-2 diabetes risk: machine learning, synthetic data and wearable health devices

P Stolfi, I Valentini, MC Palumbo, P Tieri, A Grignolio… - BMC …, 2020 - Springer
Background The aim of a recent research project was the investigation of the mechanisms
involved in the onset of type 2 diabetes in the absence of familiarity. This has led to the …

Chemotactic migration of T cells towards dendritic cells promotes the detection of rare antigens

RMA Vroomans, AFM Marée, RJ De Boer… - PLOS Computational …, 2012 - journals.plos.org
In many immunological processes chemoattraction is thought to play a role in guiding cells
to their sites of action. However, based on in vivo two-photon microscopy experiments in the …

Multiscale modeling of the early CD8 T-cell immune response in lymph nodes: an integrative study

SA Prokopiou, L Barbarroux, S Bernard, J Mafille… - Computation, 2014 - mdpi.com
CD8 T-cells are critical in controlling infection by intracellular pathogens. Upon encountering
antigen presenting cells, T-cell receptor activation promotes the differentiation of naïve CD8 …

Computational approach to 3D modeling of the lymph node geometry

A Kislitsyn, R Savinkov, M Novkovic, L Onder… - Computation, 2015 - mdpi.com
In this study we present a computational approach to the generation of the major geometric
structures of an idealized murine lymph node (LN). In this generation, we consider the major …