Control of gene expression via the yeast CWI pathway

AB Sanz, R García, M Pavón-Vergés… - International Journal of …, 2022 - mdpi.com
Living cells exposed to stressful environmental situations can elicit cellular responses that
guarantee maximal cell survival. Most of these responses are mediated by mitogen …

Opposing chromatin remodelers control transcription initiation frequency and start site selection

S Kubik, MJ Bruzzone, D Challal, R Dreos… - Nature structural & …, 2019 - nature.com
Precise nucleosome organization at eukaryotic promoters is thought to be generated by
multiple chromatin remodeler (CR) enzymes and to affect transcription initiation. Using an …

Phylogenomic Analysis of the Gammaproteobacterial Methanotrophs (Order Methylococcales) Calls for the Reclassification of Members at the Genus and Species …

FD Orata, JP Meier-Kolthoff, D Sauvageau… - Frontiers in …, 2018 - frontiersin.org
The order Methylococcales constitutes the methanotrophs–bacteria that can metabolize
methane, a potent greenhouse gas, as their sole source of energy. These bacteria are …

Diversity and phylogeny of described aerobic methanotrophs

SN Dedysh, C Knief - Methane biocatalysis: paving the way to …, 2018 - Springer
Aerobic methanotrophs are metabolically unique bacteria that are able to utilize methane as
a sole source of energy. They occur in a wide range of habitats where both methane and …

The ATP-dependent chromatin remodeling enzymes CHD6, CHD7, and CHD8 exhibit distinct nucleosome binding and remodeling activities

BJ Manning, T Yusufzai - Journal of Biological Chemistry, 2017 - ASBMB
Proper chromatin regulation is central to genome function and maintenance. The group III
chromodomain–helicase–DNA-binding (CHD) family of ATP-dependent chromatin …

Single-molecule analysis reveals linked cycles of RSC chromatin remodeling and Ace1p transcription factor binding in yeast

GD Mehta, DA Ball, PR Eriksson, RV Chereji, DJ Clark… - Molecular cell, 2018 - cell.com
It is unknown how the dynamic binding of transcription factors (TFs) is molecularly linked to
chromatin remodeling and transcription. Using single-molecule tracking (SMT), we show that …

Methanotroph-microalgae co-culture for greenhouse gas mitigation: Effect of initial biomass ratio and methane concentration

P Ruiz-Ruiz, TL Gómez-Borraz, S Revah, M Morales - Chemosphere, 2020 - Elsevier
This work evaluated the effect of different initial biomass ratios in a co-culture of an
alkaliphilic methanotrophic bacteria consortium (AMB) and the green microalga …

Diluted methane mitigation by a co-culture of alkaliphilic methanotrophs and the microalgae Scenedesmus obtusiusculus towards carbon neutrality

P Ruiz-Ruiz, TL Gómez-Borraz, A Saldivar… - Biochemical …, 2024 - Elsevier
A co-culture of an alkaliphilic methanotrophic consortium and the microalga Scenedesmus
obtusiusculus was designed to consume CH 4 and CO 2 from diluted CH 4 streams under …

Transcriptional regulation of metabolism in disease: From transcription factors to epigenetics

LJ Hawkins, R Al-Attar, KB Storey - PeerJ, 2018 - peerj.com
Every cell in an individual has largely the same genomic sequence and yet cells in different
tissues can present widely different phenotypes. This variation arises because each cell …

Description of 'Candidatus Methylocucumis oryzae', a novel Type I methanotroph with large cells and pale pink colour, isolated from an Indian rice field

PS Pandit, M Hoppert, MC Rahalkar - Antonie Van Leeuwenhoek, 2018 - Springer
An elliptical to cucumber-shaped methanotroph with large cells was isolated from a rice
rhizosphere in Western India. Strain Sn10-6 is one of the first methanotrophs to be isolated …