[HTML][HTML] Real-world data: a brief review of the methods, applications, challenges and opportunities

F Liu, D Panagiotakos - BMC Medical Research Methodology, 2022 - Springer
Background The increased adoption of the internet, social media, wearable devices, e-
health services, and other technology-driven services in medicine and healthcare has led to …

A comprehensive survey on support vector machine classification: Applications, challenges and trends

J Cervantes, F Garcia-Lamont, L Rodríguez-Mazahua… - Neurocomputing, 2020 - Elsevier
In recent years, an enormous amount of research has been carried out on support vector
machines (SVMs) and their application in several fields of science. SVMs are one of the …

Proteingym: Large-scale benchmarks for protein fitness prediction and design

P Notin, A Kollasch, D Ritter… - Advances in …, 2024 - proceedings.neurips.cc
Predicting the effects of mutations in proteins is critical to many applications, from
understanding genetic disease to designing novel proteins to address our most pressing …

The landscape of tolerated genetic variation in humans and primates

H Gao, T Hamp, J Ede, JG Schraiber, J McRae… - Science, 2023 - science.org
Personalized genome sequencing has revealed millions of genetic differences between
individuals, but our understanding of their clinical relevance remains largely incomplete. To …

Deep learning: new computational modelling techniques for genomics

G Eraslan, Ž Avsec, J Gagneur, FJ Theis - Nature Reviews Genetics, 2019 - nature.com
As a data-driven science, genomics largely utilizes machine learning to capture
dependencies in data and derive novel biological hypotheses. However, the ability to extract …

A guide to deep learning in healthcare

A Esteva, A Robicquet, B Ramsundar, V Kuleshov… - Nature medicine, 2019 - nature.com
Here we present deep-learning techniques for healthcare, centering our discussion on deep
learning in computer vision, natural language processing, reinforcement learning, and …

CADD: predicting the deleteriousness of variants throughout the human genome

P Rentzsch, D Witten, GM Cooper… - Nucleic acids …, 2019 - academic.oup.com
Abstract Combined Annotation-Dependent Depletion (CADD) is a widely used measure of
variant deleteriousness that can effectively prioritize causal variants in genetic analyses …

Artificial intelligence in healthcare

KH Yu, AL Beam, IS Kohane - Nature biomedical engineering, 2018 - nature.com
Artificial intelligence (AI) is gradually changing medical practice. With recent progress in
digitized data acquisition, machine learning and computing infrastructure, AI applications …

Clinical evolution, genetic landscape and trajectories of clonal hematopoiesis in SAMD9/SAMD9L syndromes

SS Sahoo, VB Pastor, C Goodings, RK Voss… - Nature medicine, 2021 - nature.com
Abstract Germline SAMD9 and SAMD9L mutations (SAMD9/9L mut) predispose to
myelodysplastic syndromes (MDS) with propensity for somatic rescue. In this study, we …

[PDF][PDF] VarSome: the human genomic variant search engine

C Kopanos, V Tsiolkas, A Kouris, CE Chapple… - …, 2019 - academic.oup.com
VarSome. com is a search engine, aggregator and impact analysis tool for human genetic
variation and a community-driven project aiming at sharing global expertise on human …