Quantitative imaging biomarkers: a review of statistical methods for computer algorithm comparisons

NA Obuchowski, AP Reeves… - … methods in medical …, 2015 - journals.sagepub.com
Quantitative biomarkers from medical images are becoming important tools for clinical
diagnosis, staging, monitoring, treatment planning, and development of new therapies …

Evaluating fMRI preprocessing pipelines

SC Strother - IEEE Engineering in Medicine and Biology …, 2006 - ieeexplore.ieee.org
This article reviews the evaluation and optimization of the preprocessing steps for blood-
oxygenation-level-dependent (BOLD) functional magnetic resonance imaging (fMRI). This …

Deep brain stimulation induced normalization of the human functional connectome in Parkinson's disease

A Horn, G Wenzel, F Irmen, J Huebl, N Li, WJ Neumann… - Brain, 2019 - academic.oup.com
Neuroimaging has seen a paradigm shift away from a formal description of local activity
patterns towards studying distributed brain networks. The recently defined framework of the …

Motion‐related artifacts in structural brain images revealed with independent estimates of in‐scanner head motion

NK Savalia, PF Agres, MY Chan, EJ Feczko… - Human brain …, 2017 - Wiley Online Library
Abstract Motion‐contaminated T1‐weighted (T1w) magnetic resonance imaging (MRI)
results in misestimates of brain structure. Because conventional T1w scans are not collected …

SimTB, a simulation toolbox for fMRI data under a model of spatiotemporal separability

EB Erhardt, EA Allen, Y Wei, T Eichele, VD Calhoun - Neuroimage, 2012 - Elsevier
We introduce SimTB, a MATLAB toolbox designed to simulate functional magnetic
resonance imaging (fMRI) datasets under a model of spatiotemporal separability. The …

Multifocal white matter ultrastructural abnormalities in mild traumatic brain injury with cognitive disability: a voxel-wise analysis of diffusion tensor imaging

ML Lipton, E Gellella, C Lo, T Gold… - Journal of …, 2008 - liebertpub.com
The purpose of the present study is to identify otherwise occult white matter abnormalities in
patients suffering persistent cognitive impairment due to mild traumatic brain injury (TBI) …

Prospective real‐time correction for arbitrary head motion using active markers

MB Ooi, S Krueger, WJ Thomas… - … in Medicine: An …, 2009 - Wiley Online Library
Patient motion during an MRI exam can result in major degradation of image quality, and is
of increasing concern due to the aging population and its associated diseases. This work …

Principles of magnetic resonance assessment of brain function

DG Norris - Journal of Magnetic Resonance Imaging: An …, 2006 - Wiley Online Library
MRI has advanced to being one of the major tools for the assessment of brain function. This
review article examines the basic principles that underpin these measurements. The main …

Comparison of fMRI motion correction software tools

TR Oakes, T Johnstone, KSO Walsh, LL Greischar… - Neuroimage, 2005 - Elsevier
Motion correction of fMRI data is a widely used step prior to data analysis. In this study, a
comparison of the motion correction tools provided by several leading fMRI analysis …

SimPACE: generating simulated motion corrupted BOLD data with synthetic-navigated acquisition for the development and evaluation of SLOMOCO: a new, highly …

EB Beall, MJ Lowe - Neuroimage, 2014 - Elsevier
Head motion in functional MRI and resting-state MRI is a major problem. Existing methods
do not robustly reflect the true level of motion artifact for in vivo fMRI data. The primary issue …