A reference gene catalogue of the pig gut microbiome
The pig is a major species for livestock production and is also extensively used as the
preferred model species for analyses of a wide range of human physiological functions and …
preferred model species for analyses of a wide range of human physiological functions and …
Complex archaea that bridge the gap between prokaryotes and eukaryotes
The origin of the eukaryotic cell remains one of the most contentious puzzles in modern
biology. Recent studies have provided support for the emergence of the eukaryotic host cell …
biology. Recent studies have provided support for the emergence of the eukaryotic host cell …
Version 4.0 of PaxDb: protein abundance data, integrated across model organisms, tissues, and cell‐lines
M Wang, CJ Herrmann, M Simonovic… - …, 2015 - Wiley Online Library
Protein quantification at proteome‐wide scale is an important aim, enabling insights into
fundamental cellular biology and serving to constrain experiments and theoretical models …
fundamental cellular biology and serving to constrain experiments and theoretical models …
MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
Background Recovering individual genomes from metagenomic datasets allows access to
uncultivated microbial populations that may have important roles in natural and engineered …
uncultivated microbial populations that may have important roles in natural and engineered …
An introduction to the analysis of shotgun metagenomic data
TJ Sharpton - Frontiers in plant science, 2014 - frontiersin.org
Environmental DNA sequencing has revealed the expansive biodiversity of microorganisms
and clarified the relationship between host-associated microbial communities and host …
and clarified the relationship between host-associated microbial communities and host …
Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments
SA Eichorst, D Trojan, S Roux… - Environmental …, 2018 - Wiley Online Library
Members of the phylum Acidobacteria are abundant and ubiquitous across soils. We
performed a large‐scale comparative genome analysis spanning subdivisions 1, 3, 4, 6, 8 …
performed a large‐scale comparative genome analysis spanning subdivisions 1, 3, 4, 6, 8 …
Genenames. org: the HGNC resources in 2015
KA Gray, B Yates, RL Seal, MW Wright… - Nucleic acids …, 2015 - academic.oup.com
Abstract The HUGO Gene Nomenclature Committee (HGNC) based at the European
Bioinformatics Institute (EMBL-EBI) assigns unique symbols and names to human genes. To …
Bioinformatics Institute (EMBL-EBI) assigns unique symbols and names to human genes. To …
OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species
Y Wang, D Coleman-Derr, G Chen… - Nucleic acids …, 2015 - academic.oup.com
Genome wide analysis of orthologous clusters is an important component of comparative
genomics studies. Identifying the overlap among orthologous clusters can enable us to …
genomics studies. Identifying the overlap among orthologous clusters can enable us to …
Clinical BRCA1/2 Reversion Analysis Identifies Hotspot Mutations and Predicted Neoantigens Associated with Therapy Resistance
Reversion mutations in BRCA1 or BRCA2 are associated with resistance to PARP inhibitors
and platinum. To better understand the nature of these mutations, we collated, codified, and …
and platinum. To better understand the nature of these mutations, we collated, codified, and …
Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes
INTRODUCTION Control of mosquito vectors has historically proven to be an effective
means of eliminating malaria. Human malaria is transmitted only by mosquitoes in the genus …
means of eliminating malaria. Human malaria is transmitted only by mosquitoes in the genus …